RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 ROPN1BQ9BZX4 212 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-209ENST00000557092 ROPN1Q9HAT0 212 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-209ENST00000557092 KLRF1Q9NZS2 232 aa16.86■□□□□ 0.29
NEDD1-209ENST00000557092 SLC17A7Q9P2U7 560 aa16.86■□□□□ 0.29
NEDD1-209ENST00000557092 LGALS13Q9UHV8 139 aa16.86■□□□□ 0.29
NEDD1-209ENST00000557092 ITPR2Q14571 2701 aa16.86■□□□□ 0.29
NEDD1-209ENST00000557092 CACNA1CQ13936 2221 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 C15orf38-AP3S2A0A0A6YYH1 394 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 UGT2B11O75310 529 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 ERN1O75460 977 aaKnown RBP16.85■□□□□ 0.29
NEDD1-209ENST00000557092 REM1O75628 298 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 CHEK2O96017 543 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 JUNP05412 331 aaKnown RBP16.85■□□□□ 0.29
NEDD1-209ENST00000557092 ALDH3A1P30838 453 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 NTSP30990 170 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 PTGER4P35408 488 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 CEBPEQ15744 281 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 C1orf185Q5T7R7 199 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 WDR93Q6P2C0 686 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 ANGPTL8Q6UXH0 198 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 CCDC71Q8IV32 467 aaPredicted RBP16.85■□□□□ 0.29
NEDD1-209ENST00000557092 OR7G2Q8NG99 324 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 CAVIN3Q969G5 261 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 TMBIM1Q969X1 311 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 TMEM41AQ96HV5 264 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 GNRHR2Q96P88 292 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 NODALQ96S42 347 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 MECRQ9BV79 373 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 FOLH1BQ9HBA9 442 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 LRTM1Q9HBL6 345 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 C1orf109Q9NX04 203 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 GPR55Q9Y2T6 319 aaPredicted RBP16.85■□□□□ 0.29
NEDD1-209ENST00000557092 C15orf41Q9Y2V0 281 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 WBP11Q9Y2W2 641 aaKnown RBP16.85■□□□□ 0.29
NEDD1-209ENST00000557092 FAM215AQ9Y5M1 114 aa16.85■□□□□ 0.29
NEDD1-209ENST00000557092 MYO1GB0I1T2 1018 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 TO15178 435 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 NEFHP12036 1026 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 KRT20P35900 424 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 KIR3DL1P43629 444 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 CDK9P50750 372 aaKnown RBP16.84■□□□□ 0.29
NEDD1-209ENST00000557092 CORO7P57737 925 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 ZNF155Q12901 538 aaPredicted RBP16.84■□□□□ 0.29
NEDD1-209ENST00000557092 PRSS53Q2L4Q9 553 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 FNDC7Q5VTL7 733 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 SLC30A6Q6NXT4 461 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 IKBIPQ70UQ0 350 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 GDF7Q7Z4P5 450 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 OR1J4Q8NGS1 313 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 TCP10LQ8TDR4 215 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 METTL2AQ96IZ6 378 aaKnown RBP16.84■□□□□ 0.29
NEDD1-209ENST00000557092 VSTM2LQ96N03 204 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 COL21A1Q96P44 957 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 BTBD9Q96Q07 612 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 TTYH2Q9BSA4 534 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 STMN4Q9H169 189 aaPredicted RBP16.84■□□□□ 0.29
NEDD1-209ENST00000557092 TAS2R9Q9NYW1 312 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 CCL27Q9Y4X3 112 aa16.84■□□□□ 0.29
NEDD1-209ENST00000557092 PHF3Q92576 2039 aaKnown RBP16.84■□□□□ 0.29
NEDD1-209ENST00000557092 C2orf72A6NCS6 295 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 PRAMEF25A6NGN4 478 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 ZNF500O60304 480 aaPredicted RBP16.83■□□□□ 0.28
NEDD1-209ENST00000557092 NPHS1O60500 1241 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 PLOD3O60568 738 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 COQ9O75208 318 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 HPNP05981 417 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 CHRNGP07510 517 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 LINC00032P0C843 101 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 GLI4P10075 376 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 GABRA1P14867 456 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 PRPH2P23942 346 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 ELAVL4P26378 380 aaKnown RBP16.83■□□□□ 0.28
NEDD1-209ENST00000557092 IL12BP29460 328 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 MC3RP41968 323 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 KANK2Q63ZY3 851 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 TIGD3Q6B0B8 471 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 RTL6Q6ICC9 239 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 TMEM81Q6P7N7 255 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 TMEM107Q6UX40 140 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 NPSR1Q6W5P4 371 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 SLC44A2Q8IWA5 706 aaPredicted RBP16.83■□□□□ 0.28
NEDD1-209ENST00000557092 DDIASQ8IXT1 998 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 LILRB4Q8NHJ6 448 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.83■□□□□ 0.28
NEDD1-209ENST00000557092 GFM2Q969S9 779 aaKnown RBP16.83■□□□□ 0.28
NEDD1-209ENST00000557092 TMCO6Q96DC7 493 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 UCK2Q9BZX2 261 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 UBQLN3Q9H347 655 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 GLIPR2Q9H4G4 154 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 EML4Q9HC35 981 aaKnown RBP16.83■□□□□ 0.28
NEDD1-209ENST00000557092 GALNT9Q9HCQ5 603 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 MAPRE3Q9UPY8 281 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 OR10H1Q9Y4A9 318 aa16.83■□□□□ 0.28
NEDD1-209ENST00000557092 NKX2-6A6NCS4 301 aa16.82■□□□□ 0.28
NEDD1-209ENST00000557092 OR6C70A6NIJ9 312 aa16.82■□□□□ 0.28
NEDD1-209ENST00000557092 SNPHO15079 494 aa16.82■□□□□ 0.28
NEDD1-209ENST00000557092 ABCB7O75027 752 aa16.82■□□□□ 0.28
NEDD1-209ENST00000557092 ICOSLGO75144 302 aa16.82■□□□□ 0.28
NEDD1-209ENST00000557092 HOXD4P09016 255 aaPredicted RBP16.82■□□□□ 0.28
NEDD1-209ENST00000557092 CT45A8P0DMV1 189 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms