RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 COPG1Q9Y678 874 aaKnown RBP16.13■□□□□ 0.17
SHMT2-225ENST00000556798 ZNF462Q96JM2 2506 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 FRG2CA6NGY1 282 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 CDK2AP1O14519 115 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 SLC28A2O43868 658 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 NME2P1O60361 137 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 CPSF4O95639 269 aaKnown RBP16.12■□□□□ 0.17
SHMT2-225ENST00000556798 PGRP06401 933 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 CT45A8P0DMV1 189 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 CT45A9P0DMV2 189 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 DRD5P21918 477 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 NME2P22392 152 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 ABCD3P28288 659 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 PPICP45877 212 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 NRG3P56975 720 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 FBXW4P57775 412 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 DCAF7P61962 342 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 PRR5P85299 388 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 PSG6Q00889 435 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 PLCXD2Q0VAA5 305 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 C19orf57Q0VDD7 668 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 ZNF791Q3KP31 576 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-225ENST00000556798 SPDYE7PQ495Y7 208 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 CT45A2Q5DJT8 189 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 ANXA8L1Q5VT79 327 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 SLC25A25Q6KCM7 469 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 RTL4Q6ZR62 310 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 SLC44A2Q8IWA5 706 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-225ENST00000556798 GPALPP1Q8IXQ4 340 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 CISD2Q8N5K1 135 aaKnown RBP16.12■□□□□ 0.17
SHMT2-225ENST00000556798 GLB1L3Q8NCI6 653 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-225ENST00000556798 FAM13CQ8NE31 585 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 OR10G3Q8NGC4 313 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 OR4N2Q8NGD1 307 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 PSMA8Q8TAA3 256 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 TMEM125Q96AQ2 219 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 OMA1Q96E52 524 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 GIMAP5Q96F15 307 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 OTUB1Q96FW1 271 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-225ENST00000556798 OR52E6Q96RD3 313 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 YIPF4Q9BSR8 244 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 FAM120CQ9NX05 1096 aaKnown RBP16.12■□□□□ 0.17
SHMT2-225ENST00000556798 MAP10Q9P2G4 905 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 NTNG1Q9Y2I2 539 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 NPFFR2Q9Y5X5 522 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 SVILO95425 2214 aa16.12■□□□□ 0.17
SHMT2-225ENST00000556798 NCKAP5O14513 1909 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 PRSS51A0A1B0GVH4 220 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 G3V3Y1 287 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 CCL3P10147 92 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 NCF2P19878 526 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-225ENST00000556798 CCT3P49368 545 aaKnown RBP16.11■□□□□ 0.17
SHMT2-225ENST00000556798 POLR2JP52435 117 aaKnown RBP16.11■□□□□ 0.17
SHMT2-225ENST00000556798 ARFIP2P53365 341 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 GPR85P60893 370 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 TP53BP2Q13625 1128 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 SQLEQ14534 574 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 TIGD2Q4W5G0 525 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 DESI1Q6ICB0 168 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 TMEM178AQ8NBL3 297 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 PSD4Q8NDX1 1056 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 TMBIM1Q969X1 311 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 HSPBAP1Q96EW2 488 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 C16orf58Q96GQ5 468 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 TIMMDC1Q9NPL8 285 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 NTMQ9P121 344 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 OR10H1Q9Y4A9 318 aa16.11■□□□□ 0.17
SHMT2-225ENST00000556798 A0A0G2JMM0 328 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 RNF103-CHMP3A0A140T963 221 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 A0A1W2PPB8 328 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 A0A1W2PRS3 328 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 KIR3DP1A8MWS1 328 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 ACOX3O15254 700 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 ACP2P11117 423 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 CD1EP15812 388 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 MRPL19P49406 292 aaKnown RBP16.1■□□□□ 0.17
SHMT2-225ENST00000556798 SEC24CP53992 1094 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 TLE1Q04724 770 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 GAB1Q13480 694 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 LASP1Q14847 261 aaKnown RBP16.1■□□□□ 0.17
SHMT2-225ENST00000556798 ZNHIT3Q15649 155 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-225ENST00000556798 INPP5JQ15735 1006 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-225ENST00000556798 NTRK2Q16620 822 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 MFSD12Q6NUT3 480 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 DNAJC14Q6Y2X3 702 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-225ENST00000556798 SLC34A3Q8N130 599 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 VPS37AQ8NEZ2 397 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 OR56A1Q8NGH5 318 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 SFXN5Q8TD22 340 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 SLC9A6Q92581 669 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 JADE3Q92613 823 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 VPS33AQ96AX1 596 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 SNRNP40Q96DI7 357 aaKnown RBP16.1■□□□□ 0.17
SHMT2-225ENST00000556798 CHMP6Q96FZ7 201 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 TAAR6Q96RI8 345 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 INPP5KQ9BT40 448 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 LMF2Q9BU23 707 aaKnown RBP16.1■□□□□ 0.17
SHMT2-225ENST00000556798 CCDC167Q9P0B6 97 aa16.1■□□□□ 0.17
SHMT2-225ENST00000556798 PCDHGB4Q9UN71 923 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms