RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 DCST1Q5T197 706 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 SLC22A9Q8IVM8 553 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 IFT20Q8IY31 132 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 GBP7Q8N8V2 638 aaPredicted RBP20.61■□□□□ 0.89
ACTN1-220ENST00000556433 RNASE6Q93091 150 aaKnown RBP20.61■□□□□ 0.89
ACTN1-220ENST00000556433 EXOSC8Q96B26 276 aaKnown RBP20.61■□□□□ 0.89
ACTN1-220ENST00000556433 ACPTQ9BZG2 426 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 EPB41L4BQ9H329 900 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 SERHLQ9NQF3 203 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 MAPRE3Q9UPY8 281 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 GPR55Q9Y2T6 319 aaPredicted RBP20.61■□□□□ 0.89
ACTN1-220ENST00000556433 MED13LQ71F56 2210 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 GNG14A0A1W2PPG7 69 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 CD8B2A6NJW9 211 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 GOLGA8RI6L899 631 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 RIPK2O43353 540 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 REM1O75628 298 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 RHOXF2BP0C7M4 288 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 GCKP35557 465 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 HTR6P50406 440 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 ZNF136P52737 540 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 ART1P52961 327 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 RIPPLY3P57055 190 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 HMGCS1Q01581 520 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 ACSM2AQ08AH3 577 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 ACSM2BQ68CK6 577 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 POMZP3Q6PJE2 187 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 ZNF675Q8TD23 568 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 KAT2AQ92830 837 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 TMBIM1Q969X1 311 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 APIPQ96GX9 242 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 SH3GL2Q99962 352 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 POLDIP3Q9BY77 421 aaKnown RBP20.6■□□□□ 0.89
ACTN1-220ENST00000556433 ANKRA2Q9H9E1 313 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 CRIM1Q9NZV1 1036 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 EXO1Q9UQ84 846 aaKnown RBP20.6■□□□□ 0.89
ACTN1-220ENST00000556433 STK38LQ9Y2H1 464 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 TIMM22Q9Y584 194 aa20.6■□□□□ 0.89
ACTN1-220ENST00000556433 PRAMEF25A6NGN4 478 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 FRG2CA6NGY1 282 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 CBR3O75828 277 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 ACTL6AO96019 429 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 CD1EP15812 388 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 PKNOX1P55347 436 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 BTKQ06187 659 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 SPIN4Q56A73 249 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 SAMD14Q8IZD0 417 aaPredicted RBP20.59■□□□□ 0.89
ACTN1-220ENST00000556433 OR9A2Q8NGT5 310 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 RDH11Q8TC12 318 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 C16orf78Q8WTQ4 265 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 TMCO6Q96DC7 493 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 COL21A1Q96P44 957 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 CALHM2Q9HA72 323 aa20.59■□□□□ 0.89
ACTN1-220ENST00000556433 CCDC151A5D8V7 595 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 OR6C70A6NIJ9 312 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 NME6O75414 186 aaPredicted RBP20.58■□□□□ 0.89
ACTN1-220ENST00000556433 ENO1P06733 434 aaKnown RBP20.58■□□□□ 0.89
ACTN1-220ENST00000556433 CTSSP25774 331 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 AGFG1P52594 562 aaKnown RBP20.58■□□□□ 0.89
ACTN1-220ENST00000556433 LCP2Q13094 533 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 RCAN2Q14206 197 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 HEPACAMQ14CZ8 416 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 FBXL19-AS1Q494R0 122 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 SCIMPQ6UWF3 145 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 WDSUB1Q8N9V3 476 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 OR14L1PQ8NHC6 308 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 ACMSDQ8TDX5 336 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 ERP27Q96DN0 273 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 L3HYPDHQ96EM0 354 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 GPATCH1Q9BRR8 931 aaKnown RBP20.58■□□□□ 0.89
ACTN1-220ENST00000556433 SLC35C2Q9NQQ7 365 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 GIMAP4Q9NUV9 329 aa20.58■□□□□ 0.89
ACTN1-220ENST00000556433 FOXD3Q9UJU5 478 aaPredicted RBP20.58■□□□□ 0.89
ACTN1-220ENST00000556433 MED12Q93074 2177 aa20.58■□□□□ 0.88
ACTN1-220ENST00000556433 EXPH5Q8NEV8 1989 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 CELSR1Q9NYQ6 3014 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 MBD3L4A6NDZ8 208 aaPredicted RBP20.57■□□□□ 0.88
ACTN1-220ENST00000556433 MBD3L3A6NE82 208 aaPredicted RBP20.57■□□□□ 0.88
ACTN1-220ENST00000556433 MBD3L5A6NJ08 208 aaPredicted RBP20.57■□□□□ 0.88
ACTN1-220ENST00000556433 GSTA1P08263 222 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 PYGBP11216 843 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 CYP4B1P13584 511 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 TIA1P31483 386 aaKnown RBP eCLIP20.57■□□□□ 0.88
ACTN1-220ENST00000556433 IST1P53990 364 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 SLC29A2Q14542 456 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 ERCC6LQ2NKX8 1250 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 CEP112Q8N8E3 955 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 MBD3L2Q8NHZ7 208 aaPredicted RBP20.57■□□□□ 0.88
ACTN1-220ENST00000556433 ZPLD1Q8TCW7 415 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 FAM222BQ8WU58 562 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 BTBD9Q96Q07 612 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 KCNA7Q96RP8 456 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 ADOQ96SZ5 270 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 EBPLQ9BY08 206 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 RASSF1Q9NS23 344 aa20.57■□□□□ 0.88
ACTN1-220ENST00000556433 AKAP6Q13023 2319 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 ABCB7O75027 752 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 FAM153BP0C7A2 387 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 CT45A8P0DMV1 189 aa20.56■□□□□ 0.88
ACTN1-220ENST00000556433 CT45A9P0DMV2 189 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms