RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ACVR1BP36896 505 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 GMPRP36959 345 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 PIK3CBP42338 1070 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 XKP51811 444 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 KRTAP24-1Q3LI83 254 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 PDPRQ8NCN5 879 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 OR4K14Q8NGD5 310 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 TMCO6Q96DC7 493 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-219ENST00000556432 PINK1Q9BXM7 581 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 ITPAQ9BY32 194 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 BRINP2Q9C0B6 783 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 CAB39LQ9H9S4 337 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 OPTCQ9UBM4 332 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 ANGPTL3Q9Y5C1 460 aa12.56□□□□□ -0.4
ACTN1-219ENST00000556432 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.56□□□□□ -0.41e-9■■■■□ 19.3
ACTN1-219ENST00000556432 CR1P17927 2039 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 CUBNO60494 3623 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 FRG2CA6NGY1 282 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 SUPT3HB4E1H0 165 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 DNALI1O14645 258 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-219ENST00000556432 ACOX3O15254 700 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 SUPT3HO75486 399 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 CD8BP10966 210 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 PPP3CBP16298 524 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 PTX3P26022 381 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-219ENST00000556432 EEFSECP57772 596 aaKnown RBP12.55□□□□□ -0.4
ACTN1-219ENST00000556432 HMGCS1Q01581 520 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 EXOSC7Q15024 291 aaKnown RBP12.55□□□□□ -0.4
ACTN1-219ENST00000556432 BCL2A1Q16548 175 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 RAET1LQ5VY80 246 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 STEAP4Q687X5 459 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 MRM1Q6IN84 353 aaKnown RBP12.55□□□□□ -0.4
ACTN1-219ENST00000556432 GRHL2Q6ISB3 625 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 NUDT13Q86X67 352 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 ANKMY2Q8IV38 441 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 OR4K17Q8NGC6 315 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 TSPAN17Q96FV3 270 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 LCORQ96JN0 433 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-219ENST00000556432 RHOJQ9H4E5 214 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 CDC42EP3Q9UKI2 254 aa12.55□□□□□ -0.4
ACTN1-219ENST00000556432 GOLGA6L10A0A0M3HER8 536 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 PGRMC1O00264 195 aaKnown RBP12.54□□□□□ -0.4
ACTN1-219ENST00000556432 CLOCKO15516 846 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 ADAM11O75078 769 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 REM1O75628 298 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 CGAP01215 116 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 ALDOAP04075 364 aaKnown RBP12.54□□□□□ -0.4
ACTN1-219ENST00000556432 PEPDP12955 493 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 CPMP14384 443 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 CD1DP15813 335 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 BSGP35613 385 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 CDKN1AP38936 164 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 FNTAP49354 379 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 ATP6V0D1P61421 351 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 POU4F1Q01851 419 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 FAPQ12884 760 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 PON3Q15166 354 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 FNDC9Q8TBE3 224 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 TMBIM1Q969X1 311 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 HS6ST2Q96MM7 605 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 COL21A1Q96P44 957 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 C19orf24Q9BVV8 132 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 BEX2Q9BXY8 128 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 ZNF717Q9BY31 904 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-219ENST00000556432 SLCO5A1Q9H2Y9 848 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 ALG9Q9H6U8 611 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 DDX31Q9H8H2 851 aaKnown RBP12.54□□□□□ -0.4
ACTN1-219ENST00000556432 NSMCE4AQ9NXX6 385 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 PCDHGA11Q9Y5H2 935 aa12.54□□□□□ -0.4
ACTN1-219ENST00000556432 H0YC42 278 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 K7EPI3 171 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 PLGP00747 810 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-219ENST00000556432 PORP16435 677 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-219ENST00000556432 GRK2P25098 689 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 KRT20P35900 424 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 ARFIP1P53367 373 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 TPD52P55327 224 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-219ENST00000556432 E2F2Q14209 437 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 FAM111BQ6SJ93 734 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 MILR1Q7Z6M3 343 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 GAS2L3Q86XJ1 694 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 TEX9Q8N6V9 391 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 TACO1Q9BSH4 297 aaKnown RBP12.53□□□□□ -0.4
ACTN1-219ENST00000556432 ACTR6Q9GZN1 396 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 STMN4Q9H169 189 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-219ENST00000556432 RNF122Q9H9V4 155 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 FANCFQ9NPI8 374 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 MOCS1Q9NZB8 636 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 NUDT4Q9NZJ9 180 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 MTO1Q9Y2Z2 717 aaKnown RBP12.53□□□□□ -0.4
ACTN1-219ENST00000556432 EMC9Q9Y3B6 208 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 ZNF175Q9Y473 711 aa12.53□□□□□ -0.4
ACTN1-219ENST00000556432 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 GOLGA6L6A8MZA4 724 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 H3BML4 177 aa12.52□□□□□ -0.41
ACTN1-219ENST00000556432 ZIC3O60481 467 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms