RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TMEM236Q5W0B7 351 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 LRRC66Q68CR7 880 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 KDM4DQ6B0I6 523 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GRHL2Q6ISB3 625 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MED27Q6P2C8 311 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PNCKQ6P2M8 343 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 FBXO42Q6P3S6 717 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 C22orf39Q6P5X5 142 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MBOAT1Q6ZNC8 495 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 LACC1Q8IV20 430 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 SLC44A2Q8IWA5 706 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MSRB3Q8IXL7 192 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 RAVER1Q8IY67 606 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CHPFQ8IZ52 775 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CLDN19Q8N6F1 224 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 L3MBTL4Q8NA19 623 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 OR8J2Q8NGG1 315 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 DYNC2LI1Q8TCX1 351 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF675Q8TD23 568 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 UTP15Q8TED0 518 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ZFP90Q8TF47 636 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PIH1D2Q8WWB5 315 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ASZ1Q8WWH4 475 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 AUTS2Q8WXX7 1259 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 SUSD6Q92537 303 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 UBE2E3Q969T4 207 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 TMEM159Q96B96 161 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 EFHD2Q96C19 240 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PPCDCQ96CD2 204 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 TMCO6Q96DC7 493 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 LGALS12Q96DT0 336 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 APIPQ96GX9 242 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PPP1R16AQ96I34 528 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 Q96MT0 163 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CASD1Q96PB1 797 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 SMIM14Q96QK8 99 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MAPKAP1Q9BPZ7 522 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 INPP5KQ9BT40 448 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 DOHHQ9BU89 302 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 HERC2P3Q9BVR0 1158 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 IKZF5Q9H5V7 419 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 BRF2Q9HAW0 419 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 IL26Q9NPH9 171 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MIEF1Q9NQG6 463 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 DYRK4Q9NR20 520 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ABCB10Q9NRK6 738 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 RASSF1Q9NS23 344 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GKN1Q9NS71 199 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CLN6Q9NWW5 311 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 VPS29Q9UBQ0 182 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 BTNL2Q9UIR0 455 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 KCNE5Q9UJ90 142 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 STOML2Q9UJZ1 356 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 TMCC3Q9ULS5 477 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ABCG2Q9UNQ0 655 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 RNF6Q9Y252 685 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 DLGAP4Q9Y2H0 992 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 NEUROG3Q9Y4Z2 214 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PCDHGB3Q9Y5G1 929 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 NOX1Q9Y5S8 564 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MAGED1Q9Y5V3 778 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 A3GALT2U3KPV4 340 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MN1Q10571 1320 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CROCCQ5TZA2 2017 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ZZEF1O43149 2961 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CACNA1IQ9P0X4 2223 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 LOC100506127A0A0U1RQW1 187 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CXorf51AA0A1B0GTR3 108 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 IRGMA1A4Y4 181 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 NPIPB15A6NHN6 443 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 AGAP5A6NIR3 686 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 METTL15A6NJ78 407 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 A8MVJ9 347 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 NT5C1B-RDH14C9J2C7 533 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 C5orf67F2Z3F1 127 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 MYL12BO14950 172 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 AQP9O43315 295 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SGTAO43765 313 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 BRINP1O60477 761 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 NBNO60934 754 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 DIRAS1O95057 198 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 GADD45GO95257 159 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PARNO95453 639 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 KLKB1P03952 638 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 IFNW1P05000 195 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 LCKP06239 509 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CDK1P06493 297 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PROS1P07225 676 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ABCB1P08183 1280 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 HTR1AP08908 422 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 ANXA4P09525 319 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 HSMCR30P0CW71 290 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 GPX2P18283 190 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 S100A1P23297 94 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 AQP1P29972 269 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 PBLDP30039 288 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 TIA1P31483 386 aaKnown RBP eCLIP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 CCR7P32248 378 aa4.16□□□□□ -1.74
ATXN3-241ENST00000556374 EIF2DP41214 584 aaKnown RBP4.16□□□□□ -1.74
ATXN3-241ENST00000556374 SLC6A12P48065 614 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms