RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 ROPN1BQ9BZX4 212 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-208ENST00000555806 ROPN1Q9HAT0 212 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-208ENST00000555806 KLRF1Q9NZS2 232 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 SLC17A7Q9P2U7 560 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 LGALS13Q9UHV8 139 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 ITPR2Q14571 2701 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 CACNA1CQ13936 2221 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 C15orf38-AP3S2A0A0A6YYH1 394 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 UGT2B11O75310 529 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 ERN1O75460 977 aaKnown RBP16.85■□□□□ 0.29
NEDD1-208ENST00000555806 REM1O75628 298 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 CHEK2O96017 543 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 JUNP05412 331 aaKnown RBP16.85■□□□□ 0.29
NEDD1-208ENST00000555806 ALDH3A1P30838 453 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 NTSP30990 170 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 PTGER4P35408 488 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 CEBPEQ15744 281 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 C1orf185Q5T7R7 199 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 WDR93Q6P2C0 686 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 ANGPTL8Q6UXH0 198 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 CCDC71Q8IV32 467 aaPredicted RBP16.85■□□□□ 0.29
NEDD1-208ENST00000555806 OR7G2Q8NG99 324 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 CAVIN3Q969G5 261 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 TMBIM1Q969X1 311 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 TMEM41AQ96HV5 264 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 GNRHR2Q96P88 292 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 NODALQ96S42 347 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 MECRQ9BV79 373 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 FOLH1BQ9HBA9 442 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 LRTM1Q9HBL6 345 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 C1orf109Q9NX04 203 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 GPR55Q9Y2T6 319 aaPredicted RBP16.85■□□□□ 0.29
NEDD1-208ENST00000555806 C15orf41Q9Y2V0 281 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 WBP11Q9Y2W2 641 aaKnown RBP16.85■□□□□ 0.29
NEDD1-208ENST00000555806 FAM215AQ9Y5M1 114 aa16.85■□□□□ 0.29
NEDD1-208ENST00000555806 MYO1GB0I1T2 1018 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 TO15178 435 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 NEFHP12036 1026 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 KRT20P35900 424 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 KIR3DL1P43629 444 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 CDK9P50750 372 aaKnown RBP16.84■□□□□ 0.29
NEDD1-208ENST00000555806 CORO7P57737 925 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 ZNF155Q12901 538 aaPredicted RBP16.84■□□□□ 0.29
NEDD1-208ENST00000555806 PRSS53Q2L4Q9 553 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 FNDC7Q5VTL7 733 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 SLC30A6Q6NXT4 461 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 IKBIPQ70UQ0 350 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 GDF7Q7Z4P5 450 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 OR1J4Q8NGS1 313 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 TCP10LQ8TDR4 215 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 METTL2AQ96IZ6 378 aaKnown RBP16.84■□□□□ 0.29
NEDD1-208ENST00000555806 VSTM2LQ96N03 204 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 COL21A1Q96P44 957 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 BTBD9Q96Q07 612 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 TTYH2Q9BSA4 534 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 STMN4Q9H169 189 aaPredicted RBP16.84■□□□□ 0.29
NEDD1-208ENST00000555806 TAS2R9Q9NYW1 312 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 CCL27Q9Y4X3 112 aa16.84■□□□□ 0.29
NEDD1-208ENST00000555806 PHF3Q92576 2039 aaKnown RBP16.84■□□□□ 0.29
NEDD1-208ENST00000555806 C2orf72A6NCS6 295 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 PRAMEF25A6NGN4 478 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 ZNF500O60304 480 aaPredicted RBP16.83■□□□□ 0.28
NEDD1-208ENST00000555806 NPHS1O60500 1241 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 PLOD3O60568 738 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 COQ9O75208 318 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 HPNP05981 417 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 CHRNGP07510 517 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 LINC00032P0C843 101 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 GLI4P10075 376 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 GABRA1P14867 456 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 PRPH2P23942 346 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 ELAVL4P26378 380 aaKnown RBP16.83■□□□□ 0.28
NEDD1-208ENST00000555806 IL12BP29460 328 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 MC3RP41968 323 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 KANK2Q63ZY3 851 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 TIGD3Q6B0B8 471 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 RTL6Q6ICC9 239 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 TMEM81Q6P7N7 255 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 TMEM107Q6UX40 140 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 NPSR1Q6W5P4 371 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 SLC44A2Q8IWA5 706 aaPredicted RBP16.83■□□□□ 0.28
NEDD1-208ENST00000555806 DDIASQ8IXT1 998 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 LILRB4Q8NHJ6 448 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.83■□□□□ 0.281e-12■■■■■ 35.3
NEDD1-208ENST00000555806 GFM2Q969S9 779 aaKnown RBP16.83■□□□□ 0.28
NEDD1-208ENST00000555806 TMCO6Q96DC7 493 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 UCK2Q9BZX2 261 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 UBQLN3Q9H347 655 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 GLIPR2Q9H4G4 154 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 EML4Q9HC35 981 aaKnown RBP16.83■□□□□ 0.28
NEDD1-208ENST00000555806 GALNT9Q9HCQ5 603 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 MAPRE3Q9UPY8 281 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 OR10H1Q9Y4A9 318 aa16.83■□□□□ 0.28
NEDD1-208ENST00000555806 NKX2-6A6NCS4 301 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 OR6C70A6NIJ9 312 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 SNPHO15079 494 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 ABCB7O75027 752 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 ICOSLGO75144 302 aa16.82■□□□□ 0.28
NEDD1-208ENST00000555806 HOXD4P09016 255 aaPredicted RBP16.82■□□□□ 0.28
NEDD1-208ENST00000555806 CT45A8P0DMV1 189 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms