RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 HTR5AP47898 357 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 NAPAP54920 295 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 PPIAP62937 165 aaKnown RBP4.36□□□□□ -1.71
VRK1-205ENST00000555402 NUCB2P80303 420 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 ACY1Q03154 408 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 EXOSC2Q13868 293 aaKnown RBP4.36□□□□□ -1.71
VRK1-205ENST00000555402 RIPPLY2Q5TAB7 128 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 GALNT17Q6IS24 598 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 FAAP20Q6NZ36 180 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 PAQR9Q6ZVX9 377 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 LPCAT2Q7L5N7 544 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 TSEN54Q7Z6J9 526 aaKnown RBP4.36□□□□□ -1.71
VRK1-205ENST00000555402 C19orf43Q9BQ61 176 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 TUBB1Q9H4B7 451 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 JPT2Q9H910 190 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 STARD5Q9NSY2 213 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 GPR83Q9NYM4 423 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 GHRLQ9UBU3 117 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 CIDEBQ9UHD4 219 aa4.36□□□□□ -1.71
VRK1-205ENST00000555402 IGKV3D-15A0A087WSY6 115 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 TTC26A0AVF1 554 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 LRIT2A6NDA9 550 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 WASH3PC4AMC7 463 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 H0YL77 283 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 LANCL1O43813 399 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 NUDT14O95848 222 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 IGSF6O95976 241 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 GOT2P00505 430 aaKnown RBP4.35□□□□□ -1.71
VRK1-205ENST00000555402 KRT13P13646 458 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 DPP4P27487 766 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 AXLP30530 894 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 PTGFRP43088 359 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 VCPP55072 806 aaKnown RBP4.35□□□□□ -1.71
VRK1-205ENST00000555402 MRPS6P82932 125 aaKnown RBP4.35□□□□□ -1.71
VRK1-205ENST00000555402 MS4A2Q01362 244 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 CD300CQ08708 224 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 FCHO2Q0JRZ9 810 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 OVGP1Q12889 678 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 TRIP10Q15642 601 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 ANKRD55Q3KP44 614 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 DMKNQ6E0U4 476 aaPredicted RBP4.35□□□□□ -1.71
VRK1-205ENST00000555402 SULT1C3Q6IMI6 304 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 ABRAXAS1Q6UWZ7 409 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 WASH2PQ6VEQ5 465 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 Q7L0L9 218 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 CCDC36Q8IYA8 594 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 CENPLQ8N0S6 344 aaPredicted RBP4.35□□□□□ -1.71
VRK1-205ENST00000555402 GCNT2Q8N0V5 402 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 THRSPQ92748 146 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 RBM18Q96H35 190 aaKnown RBP4.35□□□□□ -1.71
VRK1-205ENST00000555402 TPPP3Q9BW30 176 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 RIBC2Q9H4K1 309 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 PANK3Q9H999 370 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 PALMDQ9NP74 551 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 ESM1Q9NQ30 184 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 TRPV5Q9NQA5 729 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 FAM114A2Q9NRY5 505 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.35□□□□□ -1.71
VRK1-205ENST00000555402 C1orf123Q9NWV4 160 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 KLRF1Q9NZS2 232 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 CTSZQ9UBR2 303 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 LAMP5Q9UJQ1 280 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 PURGQ9UJV8 347 aaKnown RBP4.35□□□□□ -1.71
VRK1-205ENST00000555402 TMCC3Q9ULS5 477 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 MFHAS1Q9Y4C4 1052 aa4.35□□□□□ -1.71
VRK1-205ENST00000555402 A0A0J9YWU9 116 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 MAPK13O15264 365 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 SDC3O75056 442 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 OR4F21O95013 312 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 KRT6BP04259 564 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 LMO2P25791 158 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 ADRA1AP35348 466 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 KRT6CP48668 564 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 EIF2B1Q14232 305 aaKnown RBP4.34□□□□□ -1.71
VRK1-205ENST00000555402 TAF7Q15545 349 aaPredicted RBP4.34□□□□□ -1.71
VRK1-205ENST00000555402 TMEM44Q2T9K0 475 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 CNPY1Q3B7I2 92 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 USH1GQ495M9 461 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 TAF3Q5VWG9 929 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 REP15Q6BDI9 236 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 ARMCX5Q6P1M9 558 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 LRRC8BQ6P9F7 803 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 EMBQ6PCB8 327 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 ATRAIDQ6UW56 229 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 ZNF497Q6ZNH5 498 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 ARL6IP6Q8N6S5 226 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 BEST4Q8NFU0 473 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 DLX4Q92988 240 aaPredicted RBP4.34□□□□□ -1.71
VRK1-205ENST00000555402 SLC25A36Q96CQ1 311 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 HPDLQ96IR7 371 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 ELMO2Q96JJ3 720 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 ZNF599Q96NL3 588 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 VPS35Q96QK1 796 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 CCDC28BQ9BUN5 200 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 ST6GALNAC5Q9BVH7 336 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 RBM24Q9BX46 236 aaKnown RBP4.34□□□□□ -1.71
VRK1-205ENST00000555402 PNNQ9H307 717 aaKnown RBP4.34□□□□□ -1.71
VRK1-205ENST00000555402 TSPY26PQ9H489 355 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 HEXA-AS1Q9H8Q6 139 aa4.34□□□□□ -1.71
VRK1-205ENST00000555402 CENPMQ9NSP4 180 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms