RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PFDN4Q9NQP4 134 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 FAM215AQ9Y5M1 114 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 ZNF407Q9C0G0 2248 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 TTC36A6NLP5 189 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 ENO4A6NNW6 628 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 AHRRA9YTQ3 701 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 PLOD2O00469 737 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 RGS14O43566 566 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 NPHS1O60500 1241 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 TBX19O60806 448 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 COQ9O75208 318 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 CHEK2O96017 543 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 CT45A8P0DMV1 189 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 CT45A9P0DMV2 189 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 GLI4P10075 376 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 SERPINB5P36952 375 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 KIR3DL1P43629 444 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 ZFP36L2P47974 494 aaKnown RBP10.83□□□□□ -0.68
VRK1-204ENST00000555351 PNLIPRP2P54317 469 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 C2orf80Q0P641 193 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 EFR3AQ14156 821 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 PCLAFQ15004 111 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 KIAA0040Q15053 153 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 LTB4RQ15722 352 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 CT45A2Q5DJT8 189 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 VASNQ6EMK4 673 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 RTL6Q6ICC9 239 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 NOXRED1Q6NXP6 359 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 ZNF585AQ6P3V2 769 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 C4orf33Q8N1A6 199 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 OR5M9Q8NGP3 310 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 OR1J4Q8NGS1 313 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 OR9A2Q8NGT5 310 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 AENQ8WTP8 325 aaKnown RBP10.83□□□□□ -0.68
VRK1-204ENST00000555351 RNF138Q8WVD3 245 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 CAVIN3Q969G5 261 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 FCRL1Q96LA6 429 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 JSRP1Q96MG2 331 aaPredicted RBP10.83□□□□□ -0.68
VRK1-204ENST00000555351 COL21A1Q96P44 957 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 BBS4Q96RK4 519 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 TMEM109Q9BVC6 243 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 PRDM14Q9GZV8 571 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 MIEF1Q9NQG6 463 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 C1orf109Q9NX04 203 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 SPRR3Q9UBC9 169 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 TMED5Q9Y3A6 229 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 MRPS18CQ9Y3D5 142 aaKnown RBP10.83□□□□□ -0.68
VRK1-204ENST00000555351 CACNA1DQ01668 2161 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
VRK1-204ENST00000555351 APCP25054 2843 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 SMIM23A6NLE4 172 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 C19orf84I3L1E1 186 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 AZIN1O14977 448 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 ICOSLGO75144 302 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 UGT2B11O75310 529 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 ERN1O75460 977 aaKnown RBP10.82□□□□□ -0.68
VRK1-204ENST00000555351 CBR3O75828 277 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 TOXO94900 526 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 EPPINO95925 133 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 ACTL6AO96019 429 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 CAPN3P20807 821 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 MSX1P28360 303 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 PTPN6P29350 595 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 NTSP30990 170 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 VSNL1P62760 191 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 MRPS35P82673 323 aaKnown RBP10.82□□□□□ -0.68
VRK1-204ENST00000555351 BTKQ06187 659 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 TFF3Q07654 80 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 CRYZQ08257 329 aaKnown RBP10.82□□□□□ -0.68
VRK1-204ENST00000555351 SLC25A35Q3KQZ1 300 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 CYP27C1Q4G0S4 372 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 SCIMPQ6UWF3 145 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 C10orf107Q8IVU9 208 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 ULK2Q8IYT8 1036 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 PRR22Q8IZ63 422 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 ZNF295-AS1Q8N0V1 137 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 RPRMLQ8N4K4 120 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 SIMC1Q8NDZ2 872 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 GNRHR2Q96P88 292 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 TIMP4Q99727 224 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 CCT7Q99832 543 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 GATA5Q9BWX5 397 aaPredicted RBP10.82□□□□□ -0.68
VRK1-204ENST00000555351 OSBPL11Q9BXB4 747 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 EBPLQ9BY08 206 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 SLC6A15Q9H2J7 730 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 FOLH1BQ9HBA9 442 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 EML4Q9HC35 981 aaKnown RBP10.82□□□□□ -0.68
VRK1-204ENST00000555351 SENP1Q9P0U3 644 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 C19orf53Q9UNZ5 99 aaPredicted RBP10.82□□□□□ -0.68
VRK1-204ENST00000555351 EXO1Q9UQ84 846 aaKnown RBP10.82□□□□□ -0.68
VRK1-204ENST00000555351 CACNA1CQ13936 2221 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 NCKAP5O14513 1909 aa10.82□□□□□ -0.68
VRK1-204ENST00000555351 DNAJC13O75165 2243 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 LRBAP50851 2863 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 C15orf38-AP3S2A0A0A6YYH1 394 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 TLDC2A0PJX2 215 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 PRAMEF25A6NGN4 478 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 HSPB2A8KAH6 182 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 SNPHO15079 494 aa10.81□□□□□ -0.68
VRK1-204ENST00000555351 ZNF500O60304 480 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms