RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 RPAP3Q9H6T3 665 aaPredicted RBP4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 ACTR8Q9H981 624 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 GNB4Q9HAV0 340 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 AMBNQ9NP70 447 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 GDAP2Q9NXN4 497 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 PAK5Q9P286 719 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 ANKMY1Q9P2S6 941 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 ATXN10Q9UBB4 475 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 P2RX2Q9UBL9 471 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 MLXQ9UH92 298 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 DHRS7Q9Y394 339 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 U3KQV3 271 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 CCDC88BA6NC98 1476 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 A0A1B0GU03 582 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 ANKRD30BLA7E2S9 258 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 SHISA9B4DS77 424 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 PDLIM1O00151 329 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 RANBP6O60518 1105 aaKnown RBP4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 SCGB2A1O75556 95 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 DESP17661 470 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 PGFP49763 221 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 MFAP2P55001 183 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 RAG2P55895 527 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 PPIAP62937 165 aaKnown RBP4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 HSF2Q03933 536 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 PDZK1IP1Q13113 114 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 CNPY1Q3B7I2 92 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 ACER2Q5QJU3 275 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 TIPARPQ7Z3E1 657 aaKnown RBP4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 TSEN54Q7Z6J9 526 aaKnown RBP4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 SLC25A42Q86VD7 318 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 OR52J3Q8NH60 311 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 TOMM40LQ969M1 308 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 SLC25A36Q96CQ1 311 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 TSPY26PQ9H489 355 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 CENPMQ9NSP4 180 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 GPR83Q9NYM4 423 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 EPS15L1Q9UBC2 864 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 WIZO95785 1651 aa4.32□□□□□ -1.72
CKS1BP1-201ENST00000555221 CLDN3O15551 220 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 GALR3O60755 368 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 SH3BGRLO75368 114 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 VPS26AO75436 327 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 TOXO94900 526 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 IGSF6O95976 241 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 RENP00797 406 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 RFC2P35250 354 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 BRCC3P46736 316 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 HAND2P61296 217 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 MRPS6P82932 125 aaKnown RBP4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 PRKCEQ02156 737 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 EIF2B1Q14232 305 aaKnown RBP4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 C14orf28Q4W4Y0 310 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 DMKNQ6E0U4 476 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 LEG1Q6P5S2 330 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 NET1Q7Z628 596 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 OR4F17Q8NGA8 305 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 SELENOMQ8WWX9 145 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 OR4F4Q96R69 305 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 ATOH8Q96SQ7 321 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 TRIM9Q9C026 710 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 DPH5Q9H2P9 285 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 KAT8Q9H7Z6 458 aaKnown RBP4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 ESM1Q9NQ30 184 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 KLRF1Q9NZS2 232 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 MBD2Q9UBB5 411 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 GHRLQ9UBU3 117 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 KIF3AQ9Y496 699 aa4.31□□□□□ -1.72
CKS1BP1-201ENST00000555221 FANCD2Q9BXW9 1451 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 CEP164Q9UPV0 1460 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 TTC26A0AVF1 554 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 MFSD2BA6NFX1 497 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 FBLL1A6NHQ2 334 aaKnown RBP4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 ALOX15BO15296 676 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 HOXB7P09629 217 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 DPP4P27487 766 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 SHC1P29353 583 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 RPL34P49207 117 aaKnown RBP4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 ARHGDIAP52565 204 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 POLR2FP61218 127 aaKnown RBP4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 ZNF85Q03923 595 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 ZP4Q12836 540 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 CYLC2Q14093 348 aaPredicted RBP4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 C17orf58Q2M2W7 97 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 BEND6Q5SZJ8 279 aaPredicted RBP4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 FAM219BQ5XKK7 198 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 AFTPHQ6ULP2 937 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 TEX9Q8N6V9 391 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 OR2L2Q8NH16 312 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 MCHR2Q969V1 340 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 WBP1Q96G27 269 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 CARD6Q9BX69 1037 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 CCSER1Q9C0I3 900 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 ADGRL4Q9HBW9 690 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 POLD4Q9HCU8 107 aa4.3□□□□□ -1.72
CKS1BP1-201ENST00000555221 TRPV5Q9NQA5 729 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms