RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 MAPKAPK5-AS1Q8N8E1 139 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 CCDC197Q8NCU1 140 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 OR1J1Q8NGS3 322 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 OR13C5Q8NGS8 318 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 HSD17B8Q92506 261 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 COQ2Q96H96 371 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 ERGIC2Q96RQ1 377 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 TRIM9Q9C026 710 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 VCPKMTQ9H867 229 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 CHST11Q9NPF2 352 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 C2orf42Q9NWW7 574 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 RNF186Q9NXI6 227 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 THEGQ9P2T0 379 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 SEC14L3Q9UDX4 400 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 IFT52Q9Y366 437 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 PRSS21Q9Y6M0 314 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 SPATA31D1Q6ZQQ2 1576 aa4.57□□□□□ -1.68
VRK1-203ENST00000555067 ATP10DQ9P241 1426 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 KANK1Q14678 1352 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 CARMIL1Q5VZK9 1371 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 ARID2Q68CP9 1835 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 UMODL1Q5DID0 1318 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 RNF123Q5XPI4 1314 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 LOC105371242A0A075B767 164 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 TRBV5-5A0A0J9YX44 114 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 MTMR11A4FU01 709 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 PCP4L1A6NKN8 68 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 OR2AG2A6NM03 316 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 CIDEAO60543 219 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 WBP4O75554 376 aaKnown RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 VTNP04004 478 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 RHOXF2BP0C7M4 288 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 GNB3P16520 340 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 MX1P20591 662 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 NT5EP21589 574 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 CA4P22748 312 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 SYKP43405 635 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 PPIAP62937 165 aaKnown RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 MAP2K1Q02750 393 aaPredicted RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 HNRNPDQ14103 355 aaKnown RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 LRRC37A5PQ49AS3 106 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 DCAF10Q5QP82 559 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 C10orf120Q5SQS8 335 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 LRRC66Q68CR7 880 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 ZNF841Q6ZN19 808 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 STXBP4Q6ZWJ1 553 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 ECHDC2Q86YB7 292 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 WDR49Q8IV35 697 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 SLC38A6Q8IZM9 456 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 TMEM123Q8N131 208 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 PARP8Q8N3A8 854 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 ARFGAP2Q8N6H7 521 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 MLKLQ8NB16 471 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 OR52N5Q8NH56 324 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 DNAJA4Q8WW22 397 aaPredicted RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 PIGCQ92535 297 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 SLC25A36Q96CQ1 311 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 ABHD8Q96I13 439 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 C10orf90Q96M02 699 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 NEDD4LQ96PU5 975 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 ACCSQ96QU6 501 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 CITED1Q99966 193 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 RHOXF2Q9BQY4 288 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 CCM2Q9BSQ5 444 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 RAB11FIP5Q9BXF6 653 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 ROPN1BQ9BZX4 212 aaPredicted RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 OR2B2Q9GZK3 357 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 LAT2Q9GZY6 243 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 DHX33Q9H6R0 707 aaKnown RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 SGK2Q9HBY8 427 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 SDR39U1Q9NRG7 319 aaPredicted RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.56□□□□□ -1.68
VRK1-203ENST00000555067 ZNF319Q9P2F9 582 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 SUN2Q9UH99 717 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 IL36AQ9UHA7 158 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 CDH9Q9ULB4 789 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 SATB2Q9UPW6 733 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 ZNF175Q9Y473 711 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 KLF2Q9Y5W3 355 aaPredicted RBP4.56□□□□□ -1.68
VRK1-203ENST00000555067 ZHX2Q9Y6X8 837 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 FGD5Q6ZNL6 1462 aa4.56□□□□□ -1.68
VRK1-203ENST00000555067 A0A1B0GTQ1 180 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 HEATR9A2RTY3 570 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 H0YL77 283 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 NR5A2O00482 541 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 CLDN5O00501 218 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 ABCD4O14678 606 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 FPGTO14772 594 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 ALOX15BO15296 676 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 FLOT1O75955 427 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 BAG4O95429 457 aaKnown RBP4.55□□□□□ -1.68
VRK1-203ENST00000555067 OR8G3PP0DMU2 310 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 AP3M2P53677 418 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 HADHBP55084 474 aaKnown RBP4.55□□□□□ -1.68
VRK1-203ENST00000555067 CDH11P55287 796 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 SEC61GP60059 68 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 CSTF1Q05048 431 aaKnown RBP4.55□□□□□ -1.68
VRK1-203ENST00000555067 SPAG1Q07617 926 aa4.55□□□□□ -1.68
VRK1-203ENST00000555067 MFGE8Q08431 387 aaPredicted RBP4.55□□□□□ -1.68
VRK1-203ENST00000555067 IL18Q14116 193 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms