RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 WDR20Q8TBZ3 569 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 APOLD1Q96LR9 279 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 ZNF251Q9BRH9 671 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 C11orf16Q9NQ32 467 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 ARL15Q9NXU5 204 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 MBD2Q9UBB5 411 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 CRLS1Q9UJA2 301 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 ANXA2P2A6NMY6 339 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 MAGEB17A8MXT2 336 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 UPK3BL1B0FP48 263 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 UPK3BL2E5RIL1 263 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 TEX46H3BTG2 121 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 EIF1BO60739 113 aaKnown RBP14.79□□□□□ -0.04
SYNE3-203ENST00000554873 SOD1P00441 154 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 TFPIP10646 304 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 DRD2P14416 443 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 RAB3BP20337 219 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 EIF1P41567 113 aaKnown RBP14.79□□□□□ -0.04
SYNE3-203ENST00000554873 SELENOPP49908 381 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 SELENOWP63302 87 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 FABP5Q01469 135 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 TPBGQ13641 420 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 ZNF528Q3MIS6 628 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 HACD4Q5VWC8 232 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 ZNF621Q6ZSS3 439 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 OR1S1Q8NH92 325 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 SLC6A18Q96N87 628 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 SPRTNQ9H040 489 aaPredicted RBP14.79□□□□□ -0.04
SYNE3-203ENST00000554873 MARCH5Q9NX47 278 aa14.79□□□□□ -0.04
SYNE3-203ENST00000554873 AFF4Q9UHB7 1163 aaKnown RBP14.79□□□□□ -0.04
SYNE3-203ENST00000554873 KCNE1BA0A087WTH5 132 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 PLSCR5A0PG75 271 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 ST8SIA5O15466 376 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 ADAM12O43184 909 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 ALDOBP05062 364 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 AQP1P29972 269 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 GABRA5P31644 462 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 GKP32189 559 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 KIR3DL1P43629 444 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 PRMT2P55345 433 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 PUM1Q14671 1186 aaKnown RBP eCLIP14.78□□□□□ -0.04
SYNE3-203ENST00000554873 PRSS55Q6UWB4 352 aaPredicted RBP14.78□□□□□ -0.04
SYNE3-203ENST00000554873 AQP11Q8NBQ7 271 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 BEST4Q8NFU0 473 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 ZDHHC1Q8WTX9 485 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 SFT2D1Q8WV19 159 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 PLD4Q96BZ4 506 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 CMTM7Q96FZ5 175 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 DNAJC11Q9NVH1 559 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 A0A0G2JPF8 293 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 GABRR3A8MPY1 467 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 HNRNPCL3B7ZW38 293 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 SDC3O75056 442 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 NCR1O76036 304 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 SMIM6P0DI80 62 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 HNRNPCL4P0DMR1 293 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 CKBP12277 381 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 TNFRSF1BP20333 461 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 RORAP35398 523 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 GATMP50440 423 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 PLD1Q13393 1074 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 CDKN3Q16667 212 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 SPOUT1Q5T280 376 aaKnown RBP14.78□□□□□ -0.04
SYNE3-203ENST00000554873 JAZF1Q86VZ6 243 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 RNF175Q8N4F7 328 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 GAREM1Q9H706 876 aa14.78□□□□□ -0.04
SYNE3-203ENST00000554873 IMP3Q9NV31 184 aaKnown RBP14.78□□□□□ -0.04
SYNE3-203ENST00000554873 PRRG1O14668 218 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 RAB36O95755 333 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 HSD17B2P37059 387 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 WNT4P56705 351 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 ERVK-25P63136 954 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 MPPE1Q53F39 396 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 IFI44LQ53G44 452 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 CD200R1LQ6Q8B3 271 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 TCEAL3Q969E4 200 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 SPATA5L1Q9BVQ7 753 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 EBPLQ9BY08 206 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 SEMA4CQ9C0C4 833 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 CLCA2Q9UQC9 943 aa14.77□□□□□ -0.04
SYNE3-203ENST00000554873 TRDV1A0A1B0GX56 115 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 ANKDD1BA6NHY2 528 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 KPNA3O00505 521 aaPredicted RBP14.77□□□□□ -0.05
SYNE3-203ENST00000554873 PRAMEF4O60810 478 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 TBL1XO60907 577 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 SCN2BO60939 215 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 EIF3GO75821 320 aaKnown RBP eCLIP14.77□□□□□ -0.05
SYNE3-203ENST00000554873 TRBC1P01850 177 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 RLN2P04090 185 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 ACAA1P09110 424 aaPredicted RBP14.77□□□□□ -0.05
SYNE3-203ENST00000554873 NR2F6P10588 404 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 AMD1P17707 334 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 ETV5P41161 510 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 WNT3P56703 355 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 SEMG2Q02383 582 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 MTAPQ13126 283 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 PRAMEF9Q5VWM5 478 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 NOXRED1Q6NXP6 359 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 FUT10Q6P4F1 479 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 NAXDQ8IW45 347 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms