RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MYO18AQ92614 2054 aaKnown RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 A0A0A6YYC8 382 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 C2orf92A0A1B0GVN3 265 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 A0A1B0GVY2 172 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ERI2A8K979 691 aaKnown RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF732B4DXR9 585 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 H0YIG0 161 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 I3L1I5 382 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 M0QZ92 97 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CACNB4O00305 520 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 RTCAO00442 366 aaKnown RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CCL16O15467 120 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 MLNRO43193 412 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CLN5O75503 358 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CEACAM4O75871 244 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CXCL14O95715 111 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 UQCRFS1P1P0C7P4 283 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 VDRP11473 427 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 TYMPP19971 482 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 PRKACGP22612 351 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CCNE1P24864 410 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CTNNA2P26232 953 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 U2AF2P26368 475 aaKnown RBP eCLIP1.29□□□□□ -2.25e-6■□□□□ 9.7
PRPF39-208ENST00000554785 HNF4AP41235 474 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CASP3P42574 277 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SLC1A3P43003 542 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SERPINH1P50454 418 aaKnown RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 NME5P56597 212 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 KIAA1024LP59773 190 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CYCSP99999 105 aaKnown RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SEMG2Q02383 582 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SLC3A1Q07837 685 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 MTF1Q14872 753 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 MAPK11Q15759 364 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 MLF2Q15773 248 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ACKR1Q16570 336 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SGCBQ16585 318 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 LRRC37A5PQ49AS3 106 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 AARDQ4LEZ3 155 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 TAF1BQ53T94 588 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 C12orf60Q5U649 245 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 BSPRYQ5W0U4 402 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 Q6ZRP5 223 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 RAPH1Q70E73 1250 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ZER1Q7Z7L7 766 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ASPGQ86U10 573 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF444Q8N0Y2 327 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 DEFB119Q8N690 84 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 TEX26Q8N6G2 289 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF614Q8N883 585 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SPC24Q8NBT2 197 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 RNF149Q8NC42 400 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ZBTB44Q8NCP5 570 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 PSMA8Q8TAA3 256 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ATP8B4Q8TF62 1192 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 KRT35Q92764 455 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 RFT1Q96AA3 541 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 LURAP1Q96LR2 239 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 FAM218AQ96MZ4 157 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF300Q96RE9 604 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 PCDHB18PQ96TA0 734 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 OSBPL8Q9BZF1 889 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ACPTQ9BZG2 426 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 NAPBQ9H115 298 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 B3GAT2Q9NPZ5 323 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SPHK2Q9NRA0 654 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 PLCL2Q9UPR0 1127 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF510Q9Y2H8 683 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ZFC3H1O60293 1989 aaKnown RBP1.29□□□□□ -2.2
PRPF39-208ENST00000554785 TRIP11Q15643 1979 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CELSR2Q9HCU4 2923 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SVILO95425 2214 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 ITPR2Q14571 2701 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CLUHO75153 1309 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 NEDD4P46934 1319 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 SPG11Q96JI7 2443 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 TSC2P49815 1807 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 MYOFQ9NZM1 2061 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 CUBNO60494 3623 aa1.29□□□□□ -2.2
PRPF39-208ENST00000554785 IGLV7-46A0A075B6I9 117 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 hCG_38984A0A1B0GV85 526 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 CCDC162PA2VCL2 907 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 NPIPB9F8W1W9 429 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 J3QKU1 62 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 ARHGEF9O43307 516 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 AKAP3O75969 853 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 DUS4LO95620 317 aaKnown RBP1.28□□□□□ -2.2
PRPF39-208ENST00000554785 RETP07949 1114 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 SBK2P0C263 348 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 CPA3P15088 417 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 HOXB8P17481 243 aaPredicted RBP1.28□□□□□ -2.2
PRPF39-208ENST00000554785 C4BPBP20851 252 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 GIFP27352 417 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 PDHA2P29803 388 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 CLCN4P51793 760 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 KRTAP10-3P60369 221 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 HAND2P61296 217 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 BTG1P62324 171 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 IRX4P78413 519 aa1.28□□□□□ -2.2
PRPF39-208ENST00000554785 CNTN1Q12860 1018 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms