RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 RPL36Q9Y3U8 105 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 NPFFR2Q9Y5X5 522 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 MAU2Q9Y6X3 613 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ANKRD12Q6UB98 2062 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 IGKV3D-11A0A0A0MRZ8 115 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 GSAPA4D1B5 854 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TBKBP1A7MCY6 615 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SCAMP3O14828 347 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ARPC3O15145 178 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ZW10O43264 779 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SUV39H1O43463 412 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TMPRSS11DO60235 418 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 EIF4E2O60573 245 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 LDOC1O95751 146 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 GUCA1CO95843 209 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 EGFP01133 1207 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 S100BP04271 92 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 MMP11P24347 488 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TNFSF8P32971 234 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ETV5P41161 510 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ACAA2P42765 397 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ETV1P50549 477 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 WNT4P56705 351 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 DSTNP60981 165 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 NCS1P62166 190 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 CDK6Q00534 326 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 HMGCS1Q01581 520 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM115Q12893 351 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 CHIT1Q13231 466 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 GALEQ14376 348 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SMN1Q16637 294 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TIGD6Q17RP2 521 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 LRRC26Q2I0M4 334 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 PAGE2BQ5JRK9 111 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TEX30Q5JUR7 227 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ATAD3CQ5T2N8 411 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 CPTPQ5TA50 214 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SDHAF4Q5VUM1 108 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 PEAR1Q5VY43 1037 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 FCRL6Q6DN72 434 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 NIPAL3Q6P499 406 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SYCE2Q6PIF2 218 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 OTOP2Q7RTS6 562 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SLCO6A1Q86UG4 719 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 C12orf40Q86WS4 652 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ADPRHL1Q8NDY3 354 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 OR4M2Q8NGB6 313 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 OR56A1Q8NGH5 318 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SMPDL3AQ92484 453 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ABHD8Q96I13 439 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 BOD1Q96IK1 185 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 GLIPR2Q9H4G4 154 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 FAM83DQ9H4H8 585 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SARS2Q9NP81 518 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SLC2A8Q9NY64 477 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 C19orf53Q9UNZ5 99 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 A0A0B4J2E0 115 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 A0A1B0GX12 115 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TXNDC9O14530 226 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 NPIPB7O75200 414 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 NR2F6P10588 404 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 PAX6P26367 422 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 PCYT1AP49585 367 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 GPR143P51810 404 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 UCP2P55851 309 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 CCL7P80098 99 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF85Q03923 595 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SF3A2Q15428 464 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 LRRC36Q1X8D7 754 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 PRICKLE4Q2TBC4 344 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 KLHL22Q53GT1 634 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ARHGAP15Q53QZ3 475 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 OR4C11Q6IEV9 310 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TRIM40Q6P9F5 258 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 CRIP3Q6Q6R5 217 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 FAM151BQ6UXP7 276 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 LINGO2Q7L985 606 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 VN1R4Q7Z5H5 301 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 GALNT10Q86SR1 603 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SLITRK4Q8IW52 837 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SIX5Q8N196 739 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 VWA5B2Q8N398 1253 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 FAM83FQ8NEG4 500 aaPredicted RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 DMBX1Q8NFW5 382 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SLC7A13Q8TCU3 470 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 RORBQ92753 470 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 UCN3Q969E3 161 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 SLC25A28Q96A46 364 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 RPL10LQ96L21 214 aaKnown RBP3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ASB16Q96NS5 453 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 OR5M11Q96RB7 305 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 COPS4Q9BT78 406 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TBCDQ9BTW9 1192 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 TRIM8Q9BZR9 551 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 PCED1AQ9H1Q7 454 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 PRO3102Q9H379 93 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 ADGRL4Q9HBW9 690 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 CMC2Q9NRP2 79 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 DECR2Q9NUI1 292 aa3.22□□□□□ -1.89
SEC23A-207ENST00000554615 MCUBQ9NWR8 336 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms