RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 FEVQ99581 238 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 FAIM2Q9BWQ8 316 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11□□□□□ -0.65
SHMT2-212ENST00000554467 FAM170BA6NMN3 283 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 M0R129 80 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 PCDH17O14917 1159 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 TPST2O60704 377 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 SDC3O75056 442 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 RECKO95980 971 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 JUNDP17535 347 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 NTSP30990 170 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 NPTX1Q15818 432 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 NXNL2Q5VZ03 156 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 ELMOD2Q8IZ81 293 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 CADM2Q8N3J6 435 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 SLC5A8Q8N695 610 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 RORBQ92753 470 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 SLC35G5Q96KT7 338 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 OR2A5Q96R48 311 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 TMEM246Q9BRR3 403 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 NEUROD4Q9HD90 331 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 ADAM29Q9UKF5 820 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 GMPPBQ9Y5P6 360 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 LYVE1Q9Y5Y7 322 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 HS3ST3A1Q9Y663 406 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 CACNA1IQ9P0X4 2223 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 HMGN2P05204 90 aaKnown RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 RNF144AP50876 292 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 PCBP3P57721 371 aaKnown RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 PUM1Q14671 1186 aaKnown RBP eCLIP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 KDM4DQ6B0I6 523 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 LAIR1Q6GTX8 287 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 CCBE1Q6UXH8 406 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 AHSA2Q719I0 299 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 SYT13Q7L8C5 426 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 ADCK1Q86TW2 530 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 GPBAR1Q8TDU6 330 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 UTP15Q8TED0 518 aaKnown RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 HDAC2Q92769 488 aaKnown RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 YIPF6Q96EC8 236 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 RNF31Q96EP0 1072 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 KLHDC7BQ96G42 594 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 MAP6Q96JE9 813 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 PRO3102Q9H379 93 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 NAALAD2Q9Y3Q0 740 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 SEC16AO15027 2179 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 IGHV1OR15-9A0A0B4J2B8 117 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 AGRPO00253 132 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 PROM1O43490 865 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 FAM20BO75063 409 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 WNT1P04628 370 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 SLC35G6P0C7Q6 338 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 STXBP1P61764 594 aaKnown RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 RBBP4Q09028 425 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 DGUOKQ16854 277 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 COLEC12Q5KU26 742 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 MRM1Q6IN84 353 aaKnown RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 PTCRAQ6ISU1 281 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 TTC29Q8NA56 475 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 GPR32P1Q8NGA4 272 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 GTPBP3Q969Y2 492 aaKnown RBP10.99□□□□□ -0.65
SHMT2-212ENST00000554467 LRRC61Q9BV99 259 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 PRR14Q9BWN1 585 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 IL21RQ9HBE5 538 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 FBXL21Q9UKT6 434 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 ENTPD4Q9Y227 616 aa10.99□□□□□ -0.65
SHMT2-212ENST00000554467 LRP4O75096 1905 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 A0A1W2PPC4 97 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 OR2A25A4D2G3 310 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF99A8MXY4 864 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-212ENST00000554467 H0YGG7 62 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 TMCC2O75069 709 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 NR2F1P10589 423 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 DRD2P14416 443 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 FRKP42685 505 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-212ENST00000554467 ARF3P61204 181 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-212ENST00000554467 ISL1P61371 349 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 RPS15AP62244 130 aaKnown RBP10.98□□□□□ -0.65
SHMT2-212ENST00000554467 HHEXQ03014 270 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 RGS1Q08116 209 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 C19orf57Q0VDD7 668 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 SYT16Q17RD7 645 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 C6orf132Q5T0Z8 1188 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 DEF8Q6ZN54 512 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 OR4D11Q8NGI4 311 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 ANGPTL6Q8NI99 470 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 ST6GAL2Q96JF0 529 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 DACH2Q96NX9 599 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 NIPSNAP1Q9BPW8 284 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 TREX2Q9BQ50 279 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-212ENST00000554467 ORAI3Q9BRQ5 295 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 GSDMCQ9BYG8 508 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 RBCK1Q9BYM8 510 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 PADI2Q9Y2J8 665 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 LDB3O75112 727 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 LIM2P55344 173 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 VSX2P58304 361 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-212ENST00000554467 RUNX2Q13950 521 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 KIR2DS3Q14952 304 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms