RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 PTGER1P34995 402 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 PCGF2P35227 344 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 GSK3BP49841 420 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 EMDP50402 254 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 MVDP53602 400 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 PSMD4P55036 377 aaKnown RBP13.48□□□□□ -0.25
SHMT2-210ENST00000553950 IL10RAQ13651 578 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 EBPQ15125 230 aaKnown RBP13.48□□□□□ -0.25
SHMT2-210ENST00000553950 BTBD16Q32M84 506 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 PRAMEF8Q5VWM4 474 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 PRAMEF7Q5VXH5 474 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 TNFAIP8L2Q6P589 184 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-210ENST00000553950 KIRREL2Q6UWL6 708 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 DGAT2L6Q6ZPD8 337 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 C16orf62Q7Z3J2 963 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 CALHM3Q86XJ0 350 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 COX18Q8N8Q8 333 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 ZSCAN1Q8NBB4 408 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 NFAM1Q8NET5 270 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-210ENST00000553950 C16orf52Q8NHV5 167 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 ADAMTS17Q8TE56 1095 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 SLC9A6Q92581 669 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 C8orf44Q96CB5 159 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 ASB9Q96DX5 294 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 OR7D2Q96RA2 312 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 CADM1Q9BY67 442 aaKnown RBP13.48□□□□□ -0.25
SHMT2-210ENST00000553950 IKZF5Q9H5V7 419 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 CCDC86Q9H6F5 360 aaKnown RBP13.48□□□□□ -0.25
SHMT2-210ENST00000553950 TRIM45Q9H8W5 580 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-210ENST00000553950 CACYBPQ9HB71 228 aaKnown RBP13.48□□□□□ -0.25
SHMT2-210ENST00000553950 POLE3Q9NRF9 147 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 P4HTMQ9NXG6 502 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 FBXL4Q9UKA2 621 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 EXPH5Q8NEV8 1989 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 C2orf92A0A1B0GVN3 265 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 C5orf58C9J3I9 102 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 GSTA4O15217 222 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 TNFRSF21O75509 655 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 ZFAND5O76080 213 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 PDE9AO76083 593 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 NKX2-2O95096 273 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 ARAFP10398 606 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 ETFAP13804 333 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 F8A1P23610 371 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 TRHRP34981 398 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-210ENST00000553950 PPICP45877 212 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 TMED10P49755 219 aaKnown RBP13.47□□□□□ -0.25
SHMT2-210ENST00000553950 CRISP3P54108 245 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 NRG3P56975 720 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 FOXL2P58012 376 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 VEZF1Q14119 521 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 SELPLGQ14242 412 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 MTX3Q5HYI7 312 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 EXOSC6Q5RKV6 272 aaKnown RBP13.47□□□□□ -0.25
SHMT2-210ENST00000553950 IRAK1BP1Q5VVH5 260 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 JMJD6Q6NYC1 403 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-210ENST00000553950 KBTBD2Q8IY47 623 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 MICU2Q8IYU8 434 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 CLEC4FQ8N1N0 589 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 KIF2BQ8N4N8 673 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 HORMAD2Q8N7B1 307 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 APCDD1LQ8NCL9 501 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 HIPK4Q8NE63 616 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 OIT3Q8WWZ8 545 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 TP53INP1Q96A56 240 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 HSPBAP1Q96EW2 488 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 IMMP1LQ96LU5 166 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 RNF145Q96MT1 663 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 GAL3ST4Q96RP7 486 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 ITPAQ9BY32 194 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 WWTR1Q9GZV5 400 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 OR10H1Q9Y4A9 318 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
SHMT2-210ENST00000553950 SPTBN2O15020 2390 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 IGHV3-20A0A0C4DH32 117 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 TRBV11-1A0A0K0K1C0 115 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 PRORSD1PA6NEY8 169 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 HMGN4O00479 90 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 RRP8O43159 456 aaKnown RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 CLPSP04118 112 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 GUSBP08236 651 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 SPINK2P20155 84 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 DRD5P21918 477 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 LCN1P31025 176 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 SOX18P35713 384 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 KRT20P35900 424 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 MAP3K8P41279 467 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 MAN2A2P49641 1150 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 GPR143P51810 404 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 RPS26P62854 115 aaKnown RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 RNF4P78317 190 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 POU6F2P78424 691 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 MRPS22P82650 360 aaKnown RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 TRAP1Q12931 704 aaKnown RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 AIMP2Q13155 320 aaKnown RBP13.46□□□□□ -0.25
SHMT2-210ENST00000553950 DUSP8Q13202 625 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 TGIF1Q15583 401 aa13.46□□□□□ -0.25
SHMT2-210ENST00000553950 FXNQ16595 210 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms