RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 EXOC3L2Q2M3D2 409 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 KIAA1644Q3SXP7 199 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 MPPE1Q53F39 396 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 SLC35D3Q5M8T2 416 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 FFAR4Q5NUL3 377 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 TCHHL1Q5QJ38 904 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 ADAMTSL4-AS1Q5T5F5 129 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 PRAMEF5Q5TYX0 476 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 PRAMEF6Q5VXH4 476 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CARD17Q5XLA6 110 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 SEL1L3Q68CR1 1132 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 FAM109BQ6ICB4 259 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 OR4C11Q6IEV9 310 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 DOK6Q6PKX4 331 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CBLN3Q6UW01 205 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 DHRS11Q6UWP2 260 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 EIF3MQ7L2H7 374 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 DPY19L4Q7Z388 723 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 LHFPL4Q7Z7J7 247 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 GPBP1Q86WP2 473 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CBWD2Q8IUF1 395 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 EGFL6Q8IUX8 553 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ZC3H3Q8IXZ2 948 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 EFCAB13Q8IY85 973 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 TMEM123Q8N131 208 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CENPSQ8N2Z9 138 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 PARP8Q8N3A8 854 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ARL14Q8N4G2 192 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 RELL2Q8NC24 303 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 BPIFCQ8NFQ6 507 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 WDR36Q8NI36 951 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 FAM81AQ8TBF8 368 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 GPR148Q8TDV2 347 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 DNAJA4Q8WW22 397 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 ZNRF4Q8WWF5 429 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 TCP11Q8WWU5 503 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 TMEM37Q8WXS4 190 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 RPL3LQ92901 407 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 NT5C3BQ969T7 300 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 NXPE2Q96DL1 559 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 SLC41A3Q96GZ6 507 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 VSTM2LQ96N03 204 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 MAP3K3Q99759 626 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 RTP3Q9BQQ7 232 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 C11orf70Q9BRQ4 267 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 WRAP53Q9BUR4 548 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 TSSK1BQ9BXA7 367 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 MRPL13Q9BYD1 178 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 NLNQ9BYT8 704 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ROPN1BQ9BZX4 212 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 IQCGQ9H095 443 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 SLC26A1Q9H2B4 701 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 DHX33Q9H6R0 707 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 PELI2Q9HAT8 420 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 SGK2Q9HBY8 427 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 APOBEC3GQ9HC16 384 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 RAVER2Q9HCJ3 691 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 APMAPQ9HDC9 416 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 EXOC1Q9NV70 894 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 HACD3Q9P035 362 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ZNF319Q9P2F9 582 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ONECUT1Q9UBC0 465 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 POLKQ9UBT6 870 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 C19orf25Q9UFG5 118 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 CRLS1Q9UJA2 301 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CDH9Q9ULB4 789 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ZNF490Q9ULM2 529 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 SLC7A7Q9UM01 511 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 DIMT1Q9UNQ2 313 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 B9D1Q9UPM9 204 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 STK38LQ9Y2H1 464 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CHTOPQ9Y3Y2 248 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 RIPK3Q9Y572 518 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ZNF318Q5VUA4 2279 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 STK36Q9NRP7 1315 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 A0A087WUV0 522 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 A0A1B0GVL5 298 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SH3PXD2BA1X283 911 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 MBLAC1A4D2B0 266 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 OR2AG2A6NM03 316 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PRR32B1ATL7 298 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 WASH3PC4AMC7 463 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PPIAL4DF5H284 164 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SPECC1L-ADORA2AF8WAN1 911 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 POLR3GO15318 223 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 NVLO15381 856 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 LCMT2O60294 686 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 FCMRO60667 390 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SDC3O75056 442 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 BBOX1O75936 387 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ANXA9O76027 345 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 EML2O95834 649 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 TXNDC12O95881 172 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 NPPAP01160 153 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 EDN1P05305 212 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 APRTP07741 180 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ALPIP09923 528 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 RHOXF2BP0C7M4 288 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 OR8G3PP0DMU2 310 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 CT45A8P0DMV1 189 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms