RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MAP4K2Q12851 820 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 EBPQ15125 230 aaKnown RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ZNHIT3Q15649 155 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PDCD2Q16342 344 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PRR30Q53SZ7 412 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PIGGQ5H8A4 983 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 FAM71E1Q6IPT2 247 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PAOXQ6QHF9 649 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 Q6ZSR9 355 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 FAM47EQ6ZV65 393 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 LURAP1LQ8IV03 231 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 NATD1Q8N6N6 113 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF321PQ8N8H1 164 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ST6GALNAC3Q8NDV1 305 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 MDS2Q8NDY4 140 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ADCY4Q8NFM4 1077 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF675Q8TD23 568 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 DOK4Q8TEW6 326 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 NR4A3Q92570 626 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 UCN3Q969E3 161 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 MTERF3Q96E29 417 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 DTNBP1Q96EV8 351 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ZBED6CLQ96FA7 236 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 SCMH1Q96GD3 660 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ATP6V1G3Q96LB4 118 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 DHRS1Q96LJ7 313 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 TSSK3Q96PN8 268 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 SIGLEC12Q96PQ1 595 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 NPAS2Q99743 824 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 WWTR1Q9GZV5 400 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 REEP4Q9H6H4 257 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 TRIM45Q9H8W5 580 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 LIN28AQ9H9Z2 209 aaKnown RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 TNFRSF12AQ9NP84 129 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 SACM1LQ9NTJ5 587 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ATAD3AQ9NVI7 634 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 THAP1Q9NVV9 213 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 TAS2R9Q9NYW1 312 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 HEY2Q9UBP5 337 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 SEC14L3Q9UDX4 400 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ZDHHC2Q9UIJ5 367 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF223Q9UK11 482 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 MED13Q9UHV7 2174 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 TNRC6AQ8NDV7 1962 aaKnown RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 TLN1Q9Y490 2541 aaKnown RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 ATP6AP2A0A1C7CYW4 349 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 TRPC5OSA6NMA1 111 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 TMEM233B4DJY2 109 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 TFECO14948 347 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 ACOX3O15254 700 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 PRKNO60260 465 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 ATP6AP2O75787 350 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 NEURL1O76050 574 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 OR6B1O95007 311 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 AGFG2O95081 481 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 LRATO95237 230 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 JUNP05412 331 aaKnown RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 DHRS4L1P0CG22 281 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 BCKDHAP12694 445 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 CNR1P21554 472 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 SSTR4P31391 388 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 MEOX1P50221 254 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 MANFP55145 182 aaKnown RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 MRPS22P82650 360 aaKnown RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 PLCXD2Q0VAA5 305 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 SMU1Q2TAY7 513 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 PRICKLE4Q2TBC4 344 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF750Q32MQ0 723 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 RFTN2Q52LD8 501 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 KRTCAP3Q53RY4 240 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 SLC22A10Q63ZE4 541 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 FAM111BQ6SJ93 734 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 GFRALQ6UXV0 394 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 DGAT2L6Q6ZPD8 337 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 RGS9BPQ6ZS82 235 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 SZRD1Q7Z422 152 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 SLC22A16Q86VW1 577 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 C9orf40Q8IXQ3 194 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 MMP21Q8N119 569 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 LIX1Q8N485 282 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 AMER2Q8N7J2 671 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF781Q8N8C0 355 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 PSD4Q8NDX1 1056 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 C17orf47Q8NEP4 570 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 OR52R1Q8NGF1 315 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 OR9A2Q8NGT5 310 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 LRRC8CQ8TDW0 803 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 GFM2Q969S9 779 aaKnown RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 TLCD1Q96CP7 247 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 SPACA9Q96E40 222 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 CNRIP1Q96F85 164 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 MAGED4Q96JG8 741 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 LCORQ96JN0 433 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 FAM173AQ9BQD7 235 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 TMPRSS13Q9BYE2 586 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 TUBB1Q9H4B7 451 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 MANSC1Q9H8J5 431 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 C3orf14Q9HBI5 128 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 DDX18Q9NVP1 670 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms