RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ZNF765Q7L2R6 523 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 PRSS42Q7Z5A4 293 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 TMEM151BQ8IW70 566 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 LGI4Q8N135 537 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 GHDCQ8N2G8 530 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 SLC37A3Q8NCC5 494 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 C11orf65Q8NCR3 313 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 OR2L2Q8NH16 312 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 NFKBIDQ8NI38 313 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 SPPL2AQ8TCT8 520 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 OR8D1Q8WZ84 308 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 AP3S1Q92572 193 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 MSANTD3Q96H12 275 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 LINC00615Q96LM1 132 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 C1GALT1Q9NS00 363 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 NLKQ9UBE8 527 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF282Q9UDV7 671 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 PHF11Q9UIL8 331 aa11.57□□□□□ -0.56
SHMT2-207ENST00000553837 KLF2Q9Y5W3 355 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-207ENST00000553837 TRANK1O15050 2925 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 EDDM13A0A1B0GTR0 161 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 M0R129 80 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF197O14709 1029 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 TSPAN4O14817 238 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 GPR37L1O60883 481 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 ADAM11O75078 769 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF250P15622 560 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 SELENOWP63302 87 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 DOC2BQ14184 412 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 NCF4Q15080 339 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 SLC5A12Q1EHB4 618 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 PM20D2Q8IYS1 436 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 SLC34A3Q8N130 599 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 OR4C15Q8NGM1 316 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 FANK1Q8TC84 345 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF431Q8TF32 576 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-207ENST00000553837 SMG7Q92540 1137 aaKnown RBP11.56□□□□□ -0.56
SHMT2-207ENST00000553837 MARC2Q969Z3 335 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 ZBED6CLQ96FA7 236 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-207ENST00000553837 MND1Q9BWT6 205 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 LGR4Q9BXB1 951 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 PPIL3Q9H2H8 161 aaKnown RBP11.56□□□□□ -0.56
SHMT2-207ENST00000553837 MAP4K5Q9Y4K4 846 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 RANBP2P49792 3224 aaKnown RBP11.56□□□□□ -0.56
SHMT2-207ENST00000553837 COL4A3Q01955 1670 aa11.56□□□□□ -0.56
SHMT2-207ENST00000553837 A0A1W2PRG6 482 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 LYRM1O43325 122 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 CSO75390 466 aaKnown RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 IL3P08700 152 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 FAM157BP0CG42 384 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 PPIBP23284 216 aaKnown RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 F8A1P23610 371 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 SDC2P34741 201 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 P2RY2P41231 377 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 SOX9P48436 509 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ABATP80404 500 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 SPIBQ01892 262 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 C1DQ13901 141 aaKnown RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 TMEM52BQ4KMG9 183 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 KLHL12Q53G59 568 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF628Q5EBL2 1059 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 BICRALQ6AI39 1079 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ANKRD54Q6NXT1 300 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 CORO6Q6QEF8 472 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 METAP1DQ6UB28 335 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 FAM129CQ86XR2 697 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 CACUL1Q86Y37 369 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 GPALPP1Q8IXQ4 340 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ADGRF3Q8IZF5 1079 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 Q8N402 240 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ATP6V1C2Q8NEY4 427 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 OR52N2Q8NGI0 321 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 OR52J3Q8NH60 311 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 PPCDCQ96CD2 204 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 CXorf40BQ96DE9 158 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 MTERF3Q96E29 417 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 RSPO3Q9BXY4 272 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ZCCHC2Q9C0B9 1178 aaKnown RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 POLR2J2Q9GZM3 115 aaKnown RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 SLC6A16Q9GZN6 736 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ABCG4Q9H172 646 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 SLC6A17Q9H1V8 727 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 RANBP3Q9H6Z4 567 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 SYNDIG1Q9H7V2 258 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 MYNNQ9NPC7 610 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 FANCFQ9NPI8 374 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 COQ3Q9NZJ6 369 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF224Q9NZL3 707 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 TAAR2Q9P1P5 351 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 DEC1Q9P2X7 70 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 ASF1AQ9Y294 204 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 XIRP2A4UGR9 3374 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 C17orf113A0A1B0GUU1 675 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 J3KTA2 159 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 AGRPO00253 132 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 RTCAO00442 366 aaKnown RBP11.55□□□□□ -0.56
SHMT2-207ENST00000553837 FABP7O15540 132 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 TPST2O60704 377 aa11.55□□□□□ -0.56
SHMT2-207ENST00000553837 RECKO95980 971 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms