RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PTP4A1Q93096 173 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ST6GALNAC6Q969X2 333 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 EEF2KMTQ96G04 330 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 CFAP36Q96G28 342 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF274Q96GC6 653 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-210ENST00000553693 PRMT1Q99873 361 aaKnown RBP2.77□□□□□ -1.97
SCFD1-210ENST00000553693 MAPKAP1Q9BPZ7 522 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 PAXXQ9BUH6 204 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 MINDY3Q9H8M7 445 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 DNAJC17Q9NVM6 304 aaKnown RBP2.77□□□□□ -1.97
SCFD1-210ENST00000553693 FBXW2Q9UKT8 454 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 CLEC4EQ9ULY5 219 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 SBF1O95248 1867 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 CD163L1Q9NR16 1453 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 LTN1O94822 1766 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 RGPD2P0DJD1 1756 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 C4AP0C0L4 1744 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 BRCA1P38398 1863 aaKnown RBP2.76□□□□□ -1.97
SCFD1-210ENST00000553693 RNF103-CHMP3A0A140T963 221 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 KRT87PA6NCN2 255 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 NEDD8-MDP1E9PL57 170 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 FAM86B1E9PN63 330 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 RTN2O75298 545 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 ZFYP08048 801 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-210ENST00000553693 HMOX1P09601 288 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 SBK2P0C263 348 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 FAM86B2P0C5J1 330 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 CCDC192P0DO97 292 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 UROSP10746 265 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 FERP16591 822 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 DESP17661 470 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 MAPK3P27361 379 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-210ENST00000553693 CCND3P30281 292 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-210ENST00000553693 RFC4P35249 363 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 NPBWR1P48145 328 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 PTENP60484 403 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 ERVPABLB-1P60509 514 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 WASHC5Q12768 1159 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 NPRL3Q12980 569 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 C17orf58Q2M2W7 97 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 DEFB115Q30KQ5 88 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 KBTBD12Q3ZCT8 623 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 HSP90AA5PQ58FG0 334 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF789Q5FWF6 425 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 RAB12Q6IQ22 244 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF730Q6ZMV8 503 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 TMEM182Q6ZP80 229 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-210ENST00000553693 KCTD9Q7L273 389 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 SLC22A18ASQ8N1D0 253 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 OCC1Q8TAD7 63 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 SNX21Q969T3 373 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 ESAMQ96AP7 390 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 SDHCQ99643 169 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-210ENST00000553693 LSG1Q9H089 658 aaKnown RBP2.76□□□□□ -1.97
SCFD1-210ENST00000553693 TNMDQ9H2S6 317 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 COMMD8Q9NX08 183 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 IL17CQ9P0M4 197 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF319Q9P2F9 582 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 PLEKHA6Q9Y2H5 1048 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 MAP2P11137 1827 aaKnown RBP2.76□□□□□ -1.97
SCFD1-210ENST00000553693 ARFGEF1Q9Y6D6 1849 aa2.76□□□□□ -1.97
SCFD1-210ENST00000553693 PFASO15067 1338 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 PCDH11XQ9BZA7 1347 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ILVBLA1L0T0 632 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 CCDC162PA2VCL2 907 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 SDR42E2A6NKP2 422 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 KBTBD13C9JR72 458 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 SLC30A4O14863 429 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ACSL4O60488 711 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 KINO60870 393 aaKnown RBP2.75□□□□□ -1.97
SCFD1-210ENST00000553693 STAM2O75886 525 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 GH1P01241 217 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ANKRD34CP0C6C1 535 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ODC1P11926 461 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 CPA3P15088 417 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 GAP43P17677 238 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 TIA1P31483 386 aaKnown RBP eCLIP2.75□□□□□ -1.97
SCFD1-210ENST00000553693 TNFRSF4P43489 277 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 OR3A1P47881 315 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 FHITP49789 147 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 NME5P56597 212 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 MAP2K1Q02750 393 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-210ENST00000553693 GFPT1Q06210 699 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-210ENST00000553693 CNPY1Q3B7I2 92 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 IQCCQ4KMZ1 466 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 LRRC38Q5VT99 294 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 TMEM270Q6UE05 265 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ABRAXAS1Q6UWZ7 409 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 MIER3Q7Z3K6 550 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ANKRD46Q86W74 232 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 CCDC71Q8IV32 467 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-210ENST00000553693 CCDC83Q8IWF9 413 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 TDHQ8IZJ6 230 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF444Q8N0Y2 327 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-210ENST00000553693 NAT8LQ8N9F0 302 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 SMYD1Q8NB12 490 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 ST7LQ8TDW4 575 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 TBCKQ8TEA7 893 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 SEPT8Q92599 483 aa2.75□□□□□ -1.97
SCFD1-210ENST00000553693 RUFY1Q96T51 708 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms