RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TCEANCQ8N8B7 351 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 OR6T1Q8NGN1 323 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 NT5CQ8TCD5 201 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 GNPDA2Q8TDQ7 276 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 OR2M4Q96R27 311 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 NRTNQ99748 197 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 ARHGDIGQ99819 225 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 GABRG3Q99928 467 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 TSSK6Q9BXA6 273 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 TEX12Q9BXU0 123 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 ACTRT3Q9BYD9 372 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 KLHL31Q9H511 634 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 XKR8Q9H6D3 395 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 HHATLQ9HCP6 504 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 STUB1Q9UNE7 303 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 GPSM3Q9Y4H4 160 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 URADA6NGE7 173 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 M0R129 80 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 RNGTTO60942 597 aaKnown RBP12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SOX14O95416 240 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 RAB36O95755 333 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ALPPP05187 535 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 NTSR1P30989 418 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 BUD31P41223 144 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-205ENST00000553474 FUT5Q11128 374 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 GPR19Q15760 415 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SSX1Q16384 188 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 INAVAQ3KP66 663 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 CCDC190Q86UF4 302 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SLC22A16Q86VW1 577 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 AMIGO1Q86WK6 493 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 NLGN4XQ8N0W4 816 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SLC34A3Q8N130 599 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 CYP4Z2PQ8N1L4 340 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 PARP16Q8N5Y8 322 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TMEM145Q8NBT3 493 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 OR14C36Q8NHC7 312 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ELP4Q96EB1 424 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ZNF681Q96N22 645 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SLC38A2Q96QD8 506 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ZDHHC4Q9NPG8 344 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TESQ9UGI8 421 aaKnown RBP12.13□□□□□ -0.47
SHMT2-205ENST00000553474 KLF15Q9UIH9 416 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 PHF11Q9UIL8 331 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 PAIP2BQ9ULR5 123 aaKnown RBP12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TRAPPC4Q9Y296 219 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 COL4A2P08572 1712 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3KA0A087X1G2 549 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 A0A0G2JN53 185 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TMEM129A0AVI4 362 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 PRSS38A1L453 326 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3FA6NER0 549 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-205ENST00000553474 OR52A4PA6NMU1 304 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ZNF670-ZNF695F2Z2N8 137 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 M0R3H8 397 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 PGRMC2O15173 223 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 PPM1DO15297 605 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ZSCAN9O15535 394 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-205ENST00000553474 CSO75390 466 aaKnown RBP12.13□□□□□ -0.47
SHMT2-205ENST00000553474 IFI6P09912 130 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 NR2F6P10588 404 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TNNI3P19429 210 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 PRKAG1P54619 331 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ADPRHP54922 357 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 BNC1Q01954 994 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TSPAN31Q12999 210 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 GINS1Q14691 196 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 KIR2DS3Q14952 304 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SYT14P1Q58G82 188 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ZNF311Q5JNZ3 666 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3GQ6DHY5 549 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SLC27A4Q6P1M0 643 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 RASSF6Q6ZTQ3 369 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 USP30Q70CQ3 517 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 IQCHQ86VS3 1027 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 PAQR7Q86WK9 346 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 CCDC116Q8IYX3 515 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 FBXL6Q8N531 539 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 NUP43Q8NFH3 380 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TEX47Q8TBZ9 253 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 GANCQ8TET4 914 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 FGF11Q92914 225 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 OR7D2Q96RA2 312 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 POLR2J2Q9GZM3 115 aaKnown RBP12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TWSG1Q9GZX9 223 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SLC38A1Q9H2H9 487 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 MED17Q9NVC6 651 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 TVP23BQ9NYZ1 205 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 DNAJC27Q9NZQ0 273 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ANKMY1Q9P2S6 941 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ZNF229Q9UJW7 825 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 ITGB1BP2Q9UKP3 347 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 SSR3Q9UNL2 185 aa12.13□□□□□ -0.47
SHMT2-205ENST00000553474 HYKKA2RU49 373 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 K7EQS6 105 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 STK25O00506 426 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 PRODHO43272 600 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 NARSO43776 548 aaKnown RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 CYP7B1O75881 506 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 EPPINO95925 133 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms