RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 CAPN7Q9Y6W3 813 aa13.72□□□□□ -0.21
MTHFD1-204ENST00000553405 A0A096LPI6 279 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 C2orf92A0A1B0GVN3 265 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 MKRN2OSH3BPM6 223 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 FXYD1O00168 92 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 WWP2O00308 870 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 ITGA10O75578 1167 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 NKX2-2O95096 273 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 WDPCPO95876 746 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 HMGN2P05204 90 aaKnown RBP13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 GSNP06396 782 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 SNRPB2P08579 225 aaKnown RBP13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 ACP2P11117 423 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 UQCRC2P22695 453 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 ST13P50502 369 aaKnown RBP13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 MAPKAPK3Q16644 382 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 LINC00696Q6ZRV3 163 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 SLC16A11Q8NCK7 471 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 OR56A1Q8NGH5 318 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 MIPOL1Q8TD10 442 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 ZFP90Q8TF47 636 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 MOAP1Q96BY2 351 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 NTNG2Q96CW9 530 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 LCORQ96JN0 433 aaPredicted RBP13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 PANX1Q96RD7 426 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 GAL3ST4Q96RP7 486 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 C3orf14Q9HBI5 128 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 SH2D2AQ9NP31 389 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 CFL2Q9Y281 166 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 TP53TG5Q9Y2B4 290 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 YARS2Q9Y2Z4 477 aaKnown RBP13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 SNX8Q9Y5X2 465 aa13.71□□□□□ -0.21
MTHFD1-204ENST00000553405 RNF103-CHMP3A0A140T963 221 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 FRG2CA6NGY1 282 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 CDK2AP1O14519 115 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 RFXANKO14593 260 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 ERN1O75460 977 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 NEURL1O76050 574 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 OR6B1O95007 311 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 DCAF7P61962 342 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 PRR5P85299 388 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 TUBA3CQ13748 450 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 LASP1Q14847 261 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 DUSP5Q16690 384 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 ZNF791Q3KP31 576 aaPredicted RBP13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 COQ5Q5HYK3 327 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 GKAP1Q5VSY0 366 aaPredicted RBP13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 ZCCHC12Q6PEW1 402 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 TUBA3EQ6PEY2 450 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 DNAJC14Q6Y2X3 702 aaPredicted RBP13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 C6orf120Q7Z4R8 191 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 SNX32Q86XE0 403 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 SLC15A4Q8N697 577 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 RBMXL3Q8N7X1 1067 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 OR4N2Q8NGD1 307 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 HAS2Q92819 552 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 IKZF5Q9H5V7 419 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 RMND5AQ9H871 391 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 PLA2G3Q9NZ20 509 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 STMN3Q9NZ72 180 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 VAPAQ9P0L0 249 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 LHX6Q9UPM6 363 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 PCDHB14Q9Y5E9 798 aa13.7□□□□□ -0.22
MTHFD1-204ENST00000553405 PRAMEF27A3QJZ7 478 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 ADAM10O14672 748 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 ACOX3O15254 700 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 ALPPP05187 535 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 FBXO45P0C2W1 286 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 ABCD3P28288 659 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 CD96P40200 585 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 SOX3P41225 446 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 HLCSP50747 726 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 NR0B1P51843 470 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 RPS26P62854 115 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 ZNF155Q12901 538 aaPredicted RBP13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 TP53BP2Q13625 1128 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 NNATQ16517 81 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 ABHD17BQ5VST6 288 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 IRAK1BP1Q5VVH5 260 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 CDC73Q6P1J9 531 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 C10orf111Q8N326 155 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 FITM2Q8N6M3 262 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 POU5F2Q8N7G0 328 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 CDRT4Q8N9R6 151 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 CCDC197Q8NCU1 140 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 MDS2Q8NDY4 140 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 FAM110BQ8TC76 370 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 RNF138Q8WVD3 245 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 HSPBAP1Q96EW2 488 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 AURKBQ96GD4 344 aaPredicted RBP13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 SLC35A5Q9BS91 424 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 ACTRT3Q9BYD9 372 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 EQTNQ9NQ60 294 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 RYDENQ9NUL5 291 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 GIN1Q9NXP7 522 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 TEKT2Q9UIF3 430 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 LEF1Q9UJU2 399 aaPredicted RBP13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 VPS4AQ9UN37 437 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 PCDHGB4Q9UN71 923 aa13.69□□□□□ -0.22
MTHFD1-204ENST00000553405 NDUFAF1Q9Y375 327 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms