RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 BUD31P41223 144 aaPredicted RBP16.52■□□□□ 0.24
SYNE3-202ENST00000553340 CDH11P55287 796 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 TMEM215Q68D42 235 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 C17orf64Q86WR6 236 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 MEX3DQ86XN8 651 aaKnown RBP16.52■□□□□ 0.24
SYNE3-202ENST00000553340 BBS10Q8TAM1 723 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 GNPDA2Q8TDQ7 276 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 RFKQ969G6 155 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 RAD51AP1Q96B01 352 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 CREB3L1Q96BA8 519 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 HYLS1Q96M11 299 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 DCLRE1CQ96SD1 692 aaKnown RBP16.52■□□□□ 0.24
SYNE3-202ENST00000553340 WACQ9BTA9 647 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 MTG2Q9H4K7 406 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 GALNT9Q9HCQ5 603 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 MAFFQ9ULX9 164 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 PLAGL1Q9UM63 463 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 POLHQ9Y253 713 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 ASF1AQ9Y294 204 aa16.52■□□□□ 0.24
SYNE3-202ENST00000553340 DNMT3AQ9Y6K1 912 aaPredicted RBP16.52■□□□□ 0.24
SYNE3-202ENST00000553340 ICMTO60725 284 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 NOS1APO75052 506 aaPredicted RBP16.52■□□□□ 0.23
SYNE3-202ENST00000553340 LRG1P02750 347 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 TYRP14679 529 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 CTBP2P56545 445 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 DSG2Q14126 1118 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 TRILQ7L0X0 811 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 OLIG3Q7RTU3 272 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 C11orf74Q86VG3 221 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 NUDT13Q86X67 352 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 POGLUT1Q8NBL1 392 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 SLC37A3Q8NCC5 494 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 OR4M1Q8NGD0 313 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 AIF1LQ9BQI0 150 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 ZDHHC5Q9C0B5 715 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 DPEP2Q9H4A9 486 aa16.52■□□□□ 0.23
SYNE3-202ENST00000553340 ZCCHC3Q9NUD5 404 aaKnown RBP16.52■□□□□ 0.23
SYNE3-202ENST00000553340 EPPINO95925 133 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 ACADLP28330 430 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 CKAP5Q14008 2032 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 CCDC85BQ15834 202 aaPredicted RBP16.51■□□□□ 0.23
SYNE3-202ENST00000553340 GPR162Q16538 588 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 BICRALQ6AI39 1079 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 HMGN2P46Q86SG4 172 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 CCDC28AQ8IWP9 274 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 KLHL36Q8N4N3 616 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 ANKRD53Q8N9V6 530 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 VN1R2Q8NFZ6 395 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 OR8D4Q8NGM9 314 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 DTD2Q96FN9 168 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 BTBD1Q9H0C5 482 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 COL4A6Q14031 1691 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 SCN5AQ14524 2016 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 A0A087WUU8 490 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 A0A1W2PQ72 361 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 SHISA3A0PJX4 238 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 POP7O75817 140 aaKnown RBP16.51■□□□□ 0.23
SYNE3-202ENST00000553340 EVI2BP34910 448 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 TM4SF4P48230 202 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 TLE2Q04725 743 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 MLC1Q15049 377 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 LHX8Q68G74 356 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 IRF7Q92985 503 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 ZNF764Q96H86 408 aaPredicted RBP16.51■□□□□ 0.23
SYNE3-202ENST00000553340 BCL2L10Q9HD36 194 aa16.51■□□□□ 0.23
SYNE3-202ENST00000553340 TEX10Q9NXF1 929 aaPredicted RBP16.51■□□□□ 0.23
SYNE3-202ENST00000553340 FAM170BA6NMN3 283 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 TMPRSS11DO60235 418 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 FGBP02675 491 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 KELP23276 732 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 KHKP50053 298 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 CSTF1Q05048 431 aaKnown RBP16.5■□□□□ 0.23
SYNE3-202ENST00000553340 TSPAN31Q12999 210 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 CLEC12AQ5QGZ9 265 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 OR4F15Q8NGB8 312 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 RNF32Q9H0A6 362 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 HDHD2Q9H0R4 259 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 SAGE1Q9NXZ1 904 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 TAC3Q9UHF0 121 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 NUP210Q8TEM1 1887 aaPredicted RBP16.5■□□□□ 0.23
SYNE3-202ENST00000553340 C17orf113A0A1B0GUU1 675 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 CASC3O15234 703 aaKnown RBP16.5■□□□□ 0.23
SYNE3-202ENST00000553340 SYN1P17600 705 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 TAS2R41P59536 307 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 ACSM1Q08AH1 577 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 MAP4K2Q12851 820 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 ZNF155Q12901 538 aaPredicted RBP16.5■□□□□ 0.23
SYNE3-202ENST00000553340 ANGPT1Q15389 498 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 TMEM44Q2T9K0 475 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 DEFB128Q7Z7B8 93 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 DNAJA4Q8WW22 397 aaPredicted RBP16.5■□□□□ 0.23
SYNE3-202ENST00000553340 ACOT12Q8WYK0 555 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 LRIG1Q96JA1 1093 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 MRGPRX3Q96LB0 322 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 CAMK1GQ96NX5 476 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 NT5DC2Q9H857 520 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 SLC28A3Q9HAS3 691 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 FOLH1BQ9HBA9 442 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 ASB6Q9NWX5 421 aa16.5■□□□□ 0.23
SYNE3-202ENST00000553340 C2orf92A0A1B0GVN3 265 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms