RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-209ENST00000553280 Q7L0L9 218 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 KCNMB4Q86W47 210 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 ZNF781Q8N8C0 355 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 ZNRF1Q8ND25 227 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 OR5AU1Q8NGC0 362 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 ADIPOR1Q96A54 375 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 NABP1Q96AH0 204 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 NSMCE3Q96MG7 304 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 APOOQ9BUR5 198 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 ZNF696Q9H7X3 374 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 POLD4Q9HCU8 107 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 FAM114A2Q9NRY5 505 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 DEPPQ9NTK1 212 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 CACNG5Q9UF02 275 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 CIDEBQ9UHD4 219 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 RRP15Q9Y3B9 282 aaKnown RBP4.2□□□□□ -1.74
SCFD1-209ENST00000553280 AP4B1Q9Y6B7 739 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 KIF16BQ96L93 1317 aa4.2□□□□□ -1.74
SCFD1-209ENST00000553280 BCLAF3A2AJT9 711 aaKnown RBP4.19□□□□□ -1.74
SCFD1-209ENST00000553280 LRIT2A6NDA9 550 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 ARHGEF33A8MVX0 844 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 CLDN5O00501 218 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 RANBP6O60518 1105 aaKnown RBP4.19□□□□□ -1.74
SCFD1-209ENST00000553280 KIAA0754O94854 1291 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 UFL1O94874 794 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 IGSF6O95976 241 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 IGHG1P01857 330 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 CCDC159P0C7I6 412 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 ADORA3P0DMS8 318 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 SAA4P35542 130 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 CHI3L1P36222 383 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-209ENST00000553280 METAP1P53582 386 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-209ENST00000553280 BNIP1Q12981 228 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 CD226Q15762 336 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 CCDC57Q2TAC2 916 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 MOGAT2Q3SYC2 334 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 CCDC152Q4G0S7 254 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 BEND6Q5SZJ8 279 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-209ENST00000553280 AGAP7PQ5VUJ5 663 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 ARHGAP11AQ6P4F7 1023 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 GDPGP1Q6ZNW5 385 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 MOB2Q70IA6 237 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 CCDC71Q8IV32 467 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-209ENST00000553280 METTL4Q8N3J2 472 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 OR4F17Q8NGA8 305 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 OR1B1Q8NGR6 318 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 OR2T6Q8NHC8 308 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 RLN3Q8WXF3 142 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 OSTF1Q92882 214 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 LHX4Q969G2 390 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 AGAP4Q96P64 663 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 OR4F4Q96R69 305 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 LGMNQ99538 433 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 COX16Q9P0S2 106 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 THAP10Q9P2Z0 257 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-209ENST00000553280 RABL2BQ9UNT1 228 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 GAB2Q9UQC2 676 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 DHRS7Q9Y394 339 aa4.19□□□□□ -1.74
SCFD1-209ENST00000553280 IGHV4-30-2A0A087WSY4 118 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 C15orf38-AP3S2A0A0A6YYH1 394 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ASB14A6NK59 587 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 LRRC30A6NM36 301 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 K7EQG2 157 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 K7EQM0 130 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ZNF749O43361 778 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 HMMRO75330 724 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 PALMO75781 387 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 CFC1BP0CG36 223 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 CFC1P0CG37 223 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 PAX7P23759 505 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 PSMA2P25787 234 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 VCPP55072 806 aaKnown RBP4.18□□□□□ -1.74
SCFD1-209ENST00000553280 FKBP3Q00688 224 aaKnown RBP4.18□□□□□ -1.74
SCFD1-209ENST00000553280 IL9RQ01113 521 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 TFDP1Q14186 410 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ZNF146Q15072 292 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ZFP69Q49AA0 526 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 MUC21Q5SSG8 566 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 TAF3Q5VWG9 929 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 TMEM184AQ6ZMB5 413 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 NUFIP2Q7Z417 695 aaKnown RBP4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ZCCHC7Q8N3Z6 543 aaKnown RBP4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ZNF614Q8N883 585 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 SAMD12Q8N8I0 201 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 SPATA3Q8NHX4 192 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 HCAR2Q8TDS4 363 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 SHC3Q92529 594 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 SENP8Q96LD8 212 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 NAP1L5Q96NT1 182 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ZNF607Q96SK3 696 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 CABLES2Q9BTV7 478 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ALG12Q9BV10 488 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 ST6GALNAC5Q9BVH7 336 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 STRADBQ9C0K7 418 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 C1orf123Q9NWV4 160 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 BARHL2Q9NY43 387 aa4.18□□□□□ -1.74
SCFD1-209ENST00000553280 SMPD3Q9NY59 655 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-209ENST00000553280 RARRES3Q9UL19 164 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms