RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ZNF629Q9UEG4 869 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 PRODH2Q9UF12 536 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 FETUBQ9UGM5 382 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 PSME2Q9UL46 239 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 ZNF780BQ9Y6R6 833 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 FAM221AA4D161 298 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 PRAMEF25A6NGN4 478 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 PCDH7O60245 1069 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 ICOSLGO75144 302 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 CD1EP15812 388 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 DRD5P21918 477 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 PEX19P40855 299 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 PPICP45877 212 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 DCAF7P61962 342 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 FLYWCH1Q4VC44 716 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 YRDCQ86U90 279 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 LCA5Q86VQ0 697 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 OR9A2Q8NGT5 310 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 ABTB1Q969K4 478 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 BTBD9Q96Q07 612 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 TRIB1Q96RU8 372 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 OR2B2Q9GZK3 357 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 ANKRA2Q9H9E1 313 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 SERHLQ9NQF3 203 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 NFU1Q9UMS0 254 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 MAPRE3Q9UPY8 281 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 DLGAP4Q9Y2H0 992 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 GPR55Q9Y2T6 319 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 MED12LQ86YW9 2145 aa15.85■□□□□ 0.13
CHMP1A-205ENST00000548650 MPDZO75970 2070 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 C2orf72A6NCS6 295 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 RIPK2O43353 540 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 ESRRBO95718 433 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 ACTL6AO96019 429 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 IL2RAP01589 272 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 ATP5F1P24539 256 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 HMOX2P30519 316 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 IST1P53990 364 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 LCP2Q13094 533 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 SF3B4Q15427 424 aaKnown RBP eCLIP15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 SPIN4Q56A73 249 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 LGSNQ5TDP6 509 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 GBP7Q8N8V2 638 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 WDSUB1Q8N9V3 476 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 TMBIM1Q969X1 311 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 EXOSC8Q96B26 276 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 ERP27Q96DN0 273 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 L3HYPDHQ96EM0 354 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 C11orf24Q96F05 449 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 SLC35A4Q96G79 324 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 APIPQ96GX9 242 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 VSTM2LQ96N03 204 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 POLDIP3Q9BY77 421 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 CLEC4MQ9H2X3 399 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 RASSF1Q9NS23 344 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 NF1P21359 2839 aa15.84■□□□□ 0.13
CHMP1A-205ENST00000548650 ABCA4P78363 2273 aa15.83■□□□□ 0.13
CHMP1A-205ENST00000548650 OR6C70A6NIJ9 312 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 ULK1O75385 1050 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 NME6O75414 186 aaPredicted RBP15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 ENO1P06733 434 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 CT45A8P0DMV1 189 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 CT45A9P0DMV2 189 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 DRD2P14416 443 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 IMPDH1P20839 514 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 TIA1P31483 386 aaKnown RBP eCLIP15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 PRKAA2P54646 552 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 CORO7P57737 925 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 HMGCS1Q01581 520 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 CEBPEQ15744 281 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 CT45A2Q5DJT8 189 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 GALNT18Q6P9A2 607 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 NPSR1Q6W5P4 371 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 TRMT10CQ7L0Y3 403 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 CCDC116Q8IYX3 515 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 C9orf106Q8NAJ2 232 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 METTL6Q8TCB7 284 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 FAM222BQ8WU58 562 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 RNF138Q8WVD3 245 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 KAT2AQ92830 837 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 NINJ1Q92982 152 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 LRRC46Q96FV0 321 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 KCNA7Q96RP8 456 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 EBPLQ9BY08 206 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 GSTO2Q9H4Y5 243 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 CALHM2Q9HA72 323 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 PFDN4Q9NQP4 134 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 FOXD3Q9UJU5 478 aaPredicted RBP15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 CBLCQ9ULV8 474 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 EXO1Q9UQ84 846 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 STK38LQ9Y2H1 464 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 WIF1Q9Y5W5 379 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 ZFHX3Q15911 3703 aa15.83■□□□□ 0.12
CHMP1A-205ENST00000548650 GNG14A0A1W2PPG7 69 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 A6NNC1 897 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 GOLGA8RI6L899 631 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 TACR1P25103 407 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 SLCO1A2P46721 670 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 PKNOX1P55347 436 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 ACSM2AQ08AH3 577 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms