RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CT45A8P0DMV1 189 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 CT45A9P0DMV2 189 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 RPL3P39023 403 aaKnown RBP17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 MANFP55145 182 aaKnown RBP17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 HSF1Q00613 529 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 OCRLQ01968 901 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 PLCXD2Q0VAA5 305 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 CT45A2Q5DJT8 189 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 CMPK2Q5EBM0 449 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 BNC2Q6ZN30 1099 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 GHDCQ8N2G8 530 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 GOLGA6L1Q8N7Z2 621 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 OR52N2Q8NGI0 321 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 ZFP28Q8NHY6 868 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 SPPL2AQ8TCT8 520 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 NUDT8Q8WV74 236 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 DIO2Q92813 273 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 MEAF6Q9HAF1 191 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 IL1RL2Q9HB29 575 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 ACSS1Q9NUB1 689 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 SLC5A6Q9Y289 635 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 ANKRD33BA6NCL7 494 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 ACOT7O00154 380 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 KLF11O14901 512 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 SASH3O75995 380 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 PSMG1O95456 288 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 IFI6P09912 130 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 LAMP1P11279 417 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 DDX5P17844 614 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 EFNA1P20827 205 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 PRPS1L1P21108 318 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 GPC1P35052 558 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 DIO3P55073 304 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 KCNJ2P63252 427 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 RBPJQ06330 500 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNF155Q12901 538 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 C4orf17Q53FE4 359 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 CPTPQ5TA50 214 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 BICRALQ6AI39 1079 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 DESI1Q6ICB0 168 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 NPSR1Q6W5P4 371 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 RGS9BPQ6ZS82 235 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 SLC22A16Q86VW1 577 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 RIMKLAQ8IXN7 391 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 SLC34A3Q8N130 599 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNF75CPQ92670 426 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 TMBIM1Q969X1 311 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 SECISBP2Q96T21 854 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 DEFB127Q9H1M4 99 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 MARCOQ9UEW3 520 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 NINQ8N4C6 2090 aa17.2■□□□□ 0.34
PRPF40B-206ENST00000547764 COL12A1Q99715 3063 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 EXPH5Q8NEV8 1989 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 HMGB1P1B2RPK0 211 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNHIT1O43257 154 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 LRRTM2O43300 516 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 SLC19A2O60779 497 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 KITP10721 976 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 LBPP18428 481 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 CDK9P50750 372 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 CLDN8P56748 225 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 RPP38P78345 283 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 PSG6Q00889 435 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 HYAL4Q2M3T9 481 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 TBCELQ5QJ74 424 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 C1QL3Q5VWW1 255 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 LARP4Q71RC2 724 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 NUP54Q7Z3B4 507 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 WDR75Q8IWA0 830 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 SLC44A2Q8IWA5 706 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 CHERPQ8IWX8 916 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 LRRC34Q8IZ02 419 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 TMEM251Q8N6I4 163 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 HGDQ93099 445 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 COQ8BQ96D53 544 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 DOHHQ9BU89 302 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 ZDHHC11Q9H8X9 412 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNF835Q9Y2P0 537 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 DOPEY2Q9Y3R5 2298 aa17.19■□□□□ 0.34
PRPF40B-206ENST00000547764 TRGV8A0A0C4DH27 118 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 SDHDO14521 159 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 HDAC3O15379 428 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 CDC40O60508 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 UGT2B11O75310 529 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 REM1O75628 298 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 PDE9AO76083 593 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 RNF224P0DH78 156 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 CASP3P42574 277 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 MAGEA5P43359 124 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 C21orf58P58505 322 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 MLC1Q15049 377 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 WDR53Q7Z5U6 358 aaPredicted RBP17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 FGD2Q7Z6J4 655 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 SPPL2CQ8IUH8 684 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 OR4N2Q8NGD1 307 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 SSC4DQ8WTU2 575 aa17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 JSRP1Q96MG2 331 aaPredicted RBP17.18■□□□□ 0.34
PRPF40B-206ENST00000547764 RILPQ96NA2 401 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms