RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 ERCC6LQ2NKX8 1250 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 LIPMQ5VYY2 423 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 MEX3BQ6ZN04 569 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 HOMEZQ8IX15 550 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 OR9A2Q8NGT5 310 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 BTBD9Q96Q07 612 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 EBPLQ9BY08 206 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 UCK2Q9BZX2 261 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 STMN4Q9H169 189 aaPredicted RBP17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 METTL7AQ9H8H3 244 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 ALKBH4Q9NXW9 302 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 FREM3P0C091 2139 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 DCHS2Q6V1P9 2916 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 OR6C70A6NIJ9 312 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 AHRRA9YTQ3 701 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 MYO1GB0I1T2 1018 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 NPIPB8E9PQR5 432 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 ABCB7O75027 752 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 ICOSLGO75144 302 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 TRAPPC6AO75865 159 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 RSL1D1O76021 490 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 C2orf80Q0P641 193 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 FAM71E1Q6IPT2 247 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 ULK2Q8IYT8 1036 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 FAM9CQ8IZT9 166 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 RIBC1Q8N443 379 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 OR1J4Q8NGS1 313 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 KAT2AQ92830 837 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 BBS4Q96RK4 519 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 TRMOQ9BU70 441 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 C12orf65Q9H3J6 166 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 ANKZF1Q9H8Y5 726 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 MYNNQ9NPC7 610 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 TAS2R9Q9NYW1 312 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 CCL27Q9Y4X3 112 aa17.05■□□□□ 0.32
CHMP1A-203ENST00000547614 INTS1Q8N201 2190 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 C15orf38-AP3S2A0A0A6YYH1 394 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 A0A0G2JNJ9 132 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 NKX2-6A6NCS4 301 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 FAM90A27PA6NNH2 459 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 UGT2B11O75310 529 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 SLITRK5O94991 958 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 NUDT17P0C025 328 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 CT45A8P0DMV1 189 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 CT45A9P0DMV2 189 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 PRPH2P23942 346 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 MSX1P28360 303 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 PTPN6P29350 595 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 CRYZQ08257 329 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 SF3B4Q15427 424 aaKnown RBP eCLIP17.04■□□□□ 0.321e-6■■■□□ 17.6
CHMP1A-203ENST00000547614 CT45A2Q5DJT8 189 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 NHSL2Q5HYW2 709 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 RIPPLY2Q5TAB7 128 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 VASNQ6EMK4 673 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 IKBIPQ70UQ0 350 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 PM20D2Q8IYS1 436 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 C4orf33Q8N1A6 199 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 TMCO6Q96DC7 493 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 SLC35A4Q96G79 324 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 LURAP1Q96LR2 239 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 VSTM2LQ96N03 204 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 COL21A1Q96P44 957 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 NODALQ96S42 347 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 TIMP4Q99727 224 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 OSBPL11Q9BXB4 747 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 ANKRA2Q9H9E1 313 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 TNFRSF12AQ9NP84 129 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 MIEF1Q9NQG6 463 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 NPDC1Q9NQX5 325 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 MKS1Q9NXB0 559 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 Q9UFV3 132 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 HCFC1P51610 2035 aa17.04■□□□□ 0.32
CHMP1A-203ENST00000547614 A0A087WV62 115 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 TLDC2A0PJX2 215 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 TRIM13O60858 407 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 ERN1O75460 977 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 REM1O75628 298 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 EPPINO95925 133 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 ADH7P40394 386 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 PTGDSP41222 190 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 KIAA0040Q15053 153 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 DESI1Q6ICB0 168 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 NOXRED1Q6NXP6 359 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 ANGPTL8Q6UXH0 198 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 RNF165Q6ZSG1 346 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 C10orf107Q8IVU9 208 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 TMBIM1Q969X1 311 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 PRDM14Q9GZV8 571 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 KLRF1Q9NZS2 232 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 SENP1Q9P0U3 644 aa17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 EXO1Q9UQ84 846 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-203ENST00000547614 PRAMEF25A6NGN4 478 aa17.02■□□□□ 0.32
CHMP1A-203ENST00000547614 SLC28A1O00337 649 aa17.02■□□□□ 0.32
CHMP1A-203ENST00000547614 GNB5O14775 395 aa17.02■□□□□ 0.32
CHMP1A-203ENST00000547614 SNPHO15079 494 aa17.02■□□□□ 0.32
CHMP1A-203ENST00000547614 CBR3O75828 277 aa17.02■□□□□ 0.32
CHMP1A-203ENST00000547614 CAPN3P20807 821 aa17.02■□□□□ 0.32
CHMP1A-203ENST00000547614 EFR3AQ14156 821 aa17.02■□□□□ 0.32
CHMP1A-203ENST00000547614 PCLAFQ15004 111 aa17.02■□□□□ 0.32
CHMP1A-203ENST00000547614 TOMM20Q15388 145 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms