RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 WDSUB1Q8N9V3 476 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 FAM83FQ8NEG4 500 aaPredicted RBP12.17□□□□□ -0.46
CPSF6-204ENST00000547486 OR1J4Q8NGS1 313 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 OR9A2Q8NGT5 310 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 C16orf78Q8WTQ4 265 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 ABTB1Q969K4 478 aaPredicted RBP12.17□□□□□ -0.46
CPSF6-204ENST00000547486 TMBIM1Q969X1 311 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 EXOSC8Q96B26 276 aaKnown RBP12.17□□□□□ -0.46
CPSF6-204ENST00000547486 RHOXF2Q9BQY4 288 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 GSTO2Q9H4Y5 243 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 SERHLQ9NQF3 203 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 PRODH2Q9UF12 536 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 TBK1Q9UHD2 729 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 CAMK2AQ9UQM7 478 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 INTS1Q8N201 2190 aaKnown RBP12.17□□□□□ -0.46
CPSF6-204ENST00000547486 CCDC168Q8NDH2 2452 aa12.17□□□□□ -0.46
CPSF6-204ENST00000547486 HIVEP1P15822 2718 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 GNG14A0A1W2PPG7 69 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 FRG2CA6NGY1 282 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 SNPHO15079 494 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 CTAG2O75638 210 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 HMOX2P30519 316 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 UQCRC1P31930 480 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 AGFG1P52594 562 aaKnown RBP12.16□□□□□ -0.46
CPSF6-204ENST00000547486 ZNF136P52737 540 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 PKNOX1P55347 436 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 DCAF7P61962 342 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 SNTA1Q13424 505 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 NSUN5P2Q63ZY6 315 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 SLC30A6Q6NXT4 461 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 GALNT18Q6P9A2 607 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 SPNS3Q6ZMD2 512 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 LACC1Q8IV20 430 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 GSPT2Q8IYD1 628 aaKnown RBP12.16□□□□□ -0.46
CPSF6-204ENST00000547486 PM20D2Q8IYS1 436 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 CEP112Q8N8E3 955 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 LRRN4CLQ8ND94 238 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 ZNF675Q8TD23 568 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 ACMSDQ8TDX5 336 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 BTBD9Q96Q07 612 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 TRIB1Q96RU8 372 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 SH3GL2Q99962 352 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 OSBPL11Q9BXB4 747 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 EBPLQ9BY08 206 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 PFDN4Q9NQP4 134 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 SLC35C2Q9NQQ7 365 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 FETUBQ9UGM5 382 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 MAPRE3Q9UPY8 281 aa12.16□□□□□ -0.46
CPSF6-204ENST00000547486 EXO1Q9UQ84 846 aaKnown RBP12.16□□□□□ -0.46
CPSF6-204ENST00000547486 SERTM1A2A2V5 107 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 PRAMEF25A6NGN4 478 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 OR6C70A6NIJ9 312 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 CD8B2A6NJW9 211 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 B4DXG7 233 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 DVL2O14641 736 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 TSPAN2O60636 221 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 CDH16O75309 829 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 REM1O75628 298 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 ZWINTO95229 277 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 SHBGP04278 402 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 ENO1P06733 434 aaKnown RBP12.15□□□□□ -0.46
CPSF6-204ENST00000547486 GSTA1P08263 222 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 TIA1P31483 386 aaKnown RBP eCLIP12.15□□□□□ -0.461e-7■■□□□ 14
CPSF6-204ENST00000547486 DNAJA1P31689 397 aaKnown RBP12.15□□□□□ -0.46
CPSF6-204ENST00000547486 KIR2DL3P43628 341 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 SLCO1A2P46721 670 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 ACSM2AQ08AH3 577 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 CEBPEQ15744 281 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 SPIN4Q56A73 249 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 ACSM2BQ68CK6 577 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 NPSR1Q6W5P4 371 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 CCNYL1Q8N7R7 359 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 OR7G2Q8NG99 324 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 OR4N2Q8NGD1 307 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 RDH11Q8TC12 318 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 VSTM2LQ96N03 204 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 COL21A1Q96P44 957 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 ADOQ96SZ5 270 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 C12orf65Q9H3J6 166 aaKnown RBP12.15□□□□□ -0.46
CPSF6-204ENST00000547486 LIME1Q9H400 295 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 TNFRSF12AQ9NP84 129 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 MID1IP1Q9NPA3 183 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 SIRT5Q9NXA8 310 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 KLRF1Q9NZS2 232 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 CRIM1Q9NZV1 1036 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 PSMC3IPQ9P2W1 217 aaPredicted RBP12.15□□□□□ -0.46
CPSF6-204ENST00000547486 ZNF629Q9UEG4 869 aaPredicted RBP12.15□□□□□ -0.46
CPSF6-204ENST00000547486 DCDC2Q9UHG0 476 aa12.15□□□□□ -0.46
CPSF6-204ENST00000547486 F8P00451 2351 aa12.14□□□□□ -0.47
CPSF6-204ENST00000547486 FAM221AA4D161 298 aa12.14□□□□□ -0.47
CPSF6-204ENST00000547486 C17orf51A8MQB3 221 aa12.14□□□□□ -0.47
CPSF6-204ENST00000547486 KIF2AO00139 706 aaPredicted RBP12.14□□□□□ -0.47
CPSF6-204ENST00000547486 CBR3O75828 277 aa12.14□□□□□ -0.47
CPSF6-204ENST00000547486 BCAS2O75934 225 aaPredicted RBP12.14□□□□□ -0.47
CPSF6-204ENST00000547486 ACTL6AO96019 429 aa12.14□□□□□ -0.47
CPSF6-204ENST00000547486 IL2RAP01589 272 aa12.14□□□□□ -0.47
CPSF6-204ENST00000547486 ANXA4P09525 319 aaPredicted RBP12.14□□□□□ -0.47
CPSF6-204ENST00000547486 CPN1P15169 458 aa12.14□□□□□ -0.47
CPSF6-204ENST00000547486 STARP49675 285 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms