RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 NKIRAS1Q9NYS0 192 aa10.05□□□□□ -0.8
GCN1-202ENST00000547263 NOP53Q9NZM5 478 aaKnown RBP10.05□□□□□ -0.8
GCN1-202ENST00000547263 ERVK-11Q9UQG0 969 aa10.05□□□□□ -0.8
GCN1-202ENST00000547263 NINQ8N4C6 2090 aa10.05□□□□□ -0.8
GCN1-202ENST00000547263 RP1L1Q8IWN7 2480 aaPredicted RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 A0A1B0GVC2 190 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 OR6C70A6NIJ9 312 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 CAPN14A8MX76 684 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 SLCO1B7G3V0H7 640 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 HDAC3O15379 428 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 COQ9O75208 318 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 SEMA7AO75326 666 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 ERN1O75460 977 aaKnown RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 LAMP1P11279 417 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 CASP3P42574 277 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 WNT3P56703 355 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 GPR85P60893 370 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 EIF2S3LQ2VIR3 472 aaKnown RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 C4orf17Q53FE4 359 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 ATG16L1Q676U5 607 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 ANKRD26P1Q6NSI1 321 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 TMEM64Q6YI46 380 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 GK5Q6ZS86 529 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 ZNF551Q7Z340 670 aaPredicted RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 NUP54Q7Z3B4 507 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 MAVSQ7Z434 540 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 SLC34A3Q8N130 599 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 OR8J2Q8NGG1 315 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 CLHC1Q8NHS4 586 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 ZNF75CPQ92670 426 aaPredicted RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 GFM2Q969S9 779 aaKnown RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 CIDECQ96AQ7 238 aaPredicted RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 TESCQ96BS2 214 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 OMA1Q96E52 524 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 C7orf26Q96N11 449 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 PSMG3-AS1Q96PY0 264 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 C1orf50Q9BV19 199 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 TTTY12Q9BZ98 90 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 NUF2Q9BZD4 464 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 BHLHE41Q9C0J9 482 aaPredicted RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 UBQLN3Q9H347 655 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 ZNF446Q9NWS9 450 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 TUBA8Q9NY65 449 aaPredicted RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 TAS2R9Q9NYW1 312 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 SEC14L3Q9UDX4 400 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 BCAP29Q9UHQ4 241 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 ERRFI1Q9UJM3 462 aaPredicted RBP10.04□□□□□ -0.8
GCN1-202ENST00000547263 MAPRE3Q9UPY8 281 aa10.04□□□□□ -0.8
GCN1-202ENST00000547263 AKAP10O43572 662 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 ABCB7O75027 752 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 UGT2B11O75310 529 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 NKX2-2O95096 273 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 LRATO95237 230 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 LDLRP01130 860 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 P04436 131 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 ALDOCP09972 364 aaKnown RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 RNF224P0DH78 156 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 DDX5P17844 614 aaKnown RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 LBPP18428 481 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 HPCAL1P37235 193 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 PIGAP37287 484 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 CA7P43166 264 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 DNASE1L1P49184 302 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 MRPL19P49406 292 aaKnown RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 CDK9P50750 372 aaKnown RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 PNLIPRP2P54317 469 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 DIO3P55073 304 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 NRG3P56975 720 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 CORO7P57737 925 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 FBXW4P57775 412 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 KCNK10P57789 538 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 PHC1P78364 1004 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 SNTA1Q13424 505 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 HLA-DQA1Q5Y7H0 255 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 ZCCHC12Q6PEW1 402 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 TMEM107Q6UX40 140 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 GFRALQ6UXV0 394 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 WDR75Q8IWA0 830 aaKnown RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 GHDCQ8N2G8 530 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 FAM109AQ8N4B1 249 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 TMEM251Q8N6I4 163 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 OR7A2PQ8NGA2 310 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 ZFP28Q8NHY6 868 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 CDC26Q8NHZ8 85 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 PIWIL2Q8TC59 973 aaKnown RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 MGARPQ8TDB4 240 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 NUDT8Q8WV74 236 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 STON2Q8WXE9 905 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 TMEM41AQ96HV5 264 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 NODALQ96S42 347 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 ZNF703Q9H7S9 590 aaPredicted RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 ACKR4Q9NPB9 350 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 GIN1Q9NXP7 522 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 EIF3LQ9Y262 564 aaKnown RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 ZNF407Q9C0G0 2248 aa10.03□□□□□ -0.8
GCN1-202ENST00000547263 NUP214P35658 2090 aaPredicted RBP10.03□□□□□ -0.8
GCN1-202ENST00000547263 DNAJC13O75165 2243 aa10.02□□□□□ -0.81
GCN1-202ENST00000547263 NPIPA5E9PKD4 350 aa10.02□□□□□ -0.81
GCN1-202ENST00000547263 TP53I11O14683 189 aa10.02□□□□□ -0.81
GCN1-202ENST00000547263 HS6ST1O60243 411 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms