RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 USP36Q9P275 1121 aaKnown RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 OR51B4Q9Y5P0 310 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 RP1P56715 2156 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 CTSLP07711 333 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 DCDC1P59894 354 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 ABATP80404 500 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 CRYZQ08257 329 aaKnown RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 ANKRD33Q7Z3H0 272 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 ZNF676Q8N7Q3 588 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 Q8N9G6 341 aaPredicted RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 PROKR2Q8NFJ6 384 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 RLN3Q8WXF3 142 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 MUL1Q969V5 352 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TRIM43Q96BQ3 446 aaPredicted RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 OR4K3Q96R72 315 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 OR5M11Q96RB7 305 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TM9SF2Q99805 663 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TBL1XR1Q9BZK7 514 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 DKK3Q9UBP4 350 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 ALPK2Q86TB3 2170 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TRBV5-4A0A0C4DH59 114 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 SLC5A10A0PJK1 596 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 PORP16435 677 aaPredicted RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 MNDAP41218 407 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 CHRNEQ04844 493 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 BICRALQ6AI39 1079 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 SYCE2Q6PIF2 218 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 ZBTB8BQ8NAP8 495 aaPredicted RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 VN1R2Q8NFZ6 395 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 ADAMTS16Q8TE57 1224 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 KLHDC7BQ96G42 594 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TTYH2Q9BSA4 534 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TCF7L1Q9HCS4 588 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TMEM184CQ9NVA4 438 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TBCCD1Q9NVR7 557 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 PPM1DO15297 605 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 ORC5O43913 435 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 EN2P19622 333 aaPredicted RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 GBX2P52951 348 aaPredicted RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 CTBSQ01459 385 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 GPR19Q15760 415 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 C12orf40Q86WS4 652 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 TMIEQ8NEW7 156 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 THAP3Q8WTV1 239 aaPredicted RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 CHTF18Q8WVB6 975 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 COQ8BQ96D53 544 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 LYSMD1Q96S90 227 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 CDADC1Q9BWV3 514 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 EGLN3Q9H6Z9 239 aa14.81□□□□□ -0.04
CUX1-211ENST00000546411 LYARQ9NX58 379 aaKnown RBP14.81□□□□□ -0.04
CUX1-211ENST00000546411 TRAV6A0A075B6T7 132 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 PLPP1O14494 284 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 NDUFV2P19404 249 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 STAT5AP42229 794 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 RHAGQ02094 409 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 PIP5KL1Q5T9C9 394 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 ANKK1Q8NFD2 765 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 OR2L5Q8NG80 312 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 OR8H1Q8NGG4 311 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 PTCHD1Q96NR3 888 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 MBOAT4Q96T53 435 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 RMI1Q9H9A7 625 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 MBNL1Q9NR56 388 aaKnown RBP14.8□□□□□ -0.04
CUX1-211ENST00000546411 KCMF1Q9P0J7 381 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 CPED1A4D0V7 1026 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 LINC01553A4QN01 128 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 PSMD9O00233 223 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 SDC3O75056 442 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 CSTAP01040 98 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 IGFBP1P08833 259 aaPredicted RBP14.8□□□□□ -0.04
CUX1-211ENST00000546411 LTB4RQ15722 352 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 TMEM44Q2T9K0 475 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 ADPRMQ3LIE5 342 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 LRIF1Q5T3J3 769 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 DNAJC22Q8N4W6 341 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 OR5K2Q8NHB8 316 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 C1orf216Q8TAB5 229 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 CENPOQ9BU64 300 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 RNF167Q9H6Y7 350 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 A0A1W2PQL4 384 aaPredicted RBP14.8□□□□□ -0.04
CUX1-211ENST00000546411 C2orf74A8MZ97 194 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 GYPBP06028 91 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 PRR35P0CG20 571 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 CAV3P56539 151 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 EXOSC7Q15024 291 aaKnown RBP14.8□□□□□ -0.04
CUX1-211ENST00000546411 TCTN1Q2MV58 587 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 GFOD2Q3B7J2 385 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 FAM83HQ6ZRV2 1179 aaPredicted RBP14.8□□□□□ -0.04
CUX1-211ENST00000546411 PPP1R14BQ96C90 147 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 ALG14Q96F25 216 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 LGR4Q9BXB1 951 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 PELI2Q9HAT8 420 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 EXTL2Q9UBQ6 330 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 SLC23A2Q9UGH3 650 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 MRTO4Q9UKD2 239 aaKnown RBP14.8□□□□□ -0.04
CUX1-211ENST00000546411 PCDHGB6Q9Y5F9 930 aa14.8□□□□□ -0.04
CUX1-211ENST00000546411 FAM171A2A8MVW0 826 aa14.79□□□□□ -0.04
CUX1-211ENST00000546411 WBP4O75554 376 aaKnown RBP14.79□□□□□ -0.04
CUX1-211ENST00000546411 LIPAP38571 399 aa14.79□□□□□ -0.04
CUX1-211ENST00000546411 MINDY2Q8NBR6 621 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms