RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 MID2Q9UJV3 735 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 ITGB1BP2Q9UKP3 347 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 EXO1Q9UQ84 846 aaKnown RBP8.56□□□□□ -1.04
YBX3-218ENST00000546298 DTX4Q9Y2E6 619 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 GPR55Q9Y2T6 319 aaPredicted RBP8.56□□□□□ -1.04
YBX3-218ENST00000546298 TIMM22Q9Y584 194 aa8.56□□□□□ -1.04
YBX3-218ENST00000546298 PRRC2CQ9Y520 2896 aaKnown RBP8.56□□□□□ -1.04
YBX3-218ENST00000546298 PRAMEF25A6NGN4 478 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 OR6C70A6NIJ9 312 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 G3V2L1 256 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 SYT5O00445 386 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 COPEO14579 308 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 ICOSLGO75144 302 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 COQ9O75208 318 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 UGT2B11O75310 529 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 ERN1O75460 977 aaKnown RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 ZWINTO95229 277 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 PROCP04070 461 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 CPA3P15088 417 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 BMP7P18075 431 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 DDCP20711 480 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 CEACAM8P31997 349 aaPredicted RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 CRHR1P34998 444 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 TIMP3P35625 211 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 NAGLUP54802 743 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 DNAJB13P59910 316 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 RAE1P78406 368 aaKnown RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 ZNF763Q0D2J5 394 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 C2orf80Q0P641 193 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 GTF3C1Q12789 2109 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 RCAN2Q14206 197 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 CEBPEQ15744 281 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 ACSF3Q4G176 576 aaPredicted RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 EIPR1Q53HC9 387 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 ZNF628Q5EBL2 1059 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 WIPI1Q5MNZ9 446 aaPredicted RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 NSUN5P2Q63ZY6 315 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 FAM180BQ6P0A1 224 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 SCIMPQ6UWF3 145 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 ENPP6Q6UWR7 440 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 ARSKQ6UWY0 536 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 CDH24Q86UP0 819 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 TDRPQ86YL5 185 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 LIX1LQ8IVB5 337 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 OR9A2Q8NGT5 310 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 MZB1Q8WU39 189 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 UBLCP1Q8WVY7 318 aaPredicted RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 KAT2AQ92830 837 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 TMBIM1Q969X1 311 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 NTNG2Q96CW9 530 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 C11orf24Q96F05 449 aaPredicted RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 SLC35A4Q96G79 324 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 METTL2AQ96IZ6 378 aaKnown RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 BTBD9Q96Q07 612 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 NODALQ96S42 347 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 UGT2B28Q9BY64 529 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 EPB41L4BQ9H329 900 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 GSTO2Q9H4Y5 243 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 MIEF1Q9NQG6 463 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 TAS2R7Q9NYW3 318 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 ZNF629Q9UEG4 869 aaPredicted RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 FOXD3Q9UJU5 478 aaPredicted RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 CAMK2AQ9UQM7 478 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 SLC6A5Q9Y345 797 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 OR10H1Q9Y4A9 318 aa8.55□□□□□ -1.04
YBX3-218ENST00000546298 NCOA6Q14686 2063 aaPredicted RBP8.55□□□□□ -1.04
YBX3-218ENST00000546298 A0A087WV62 115 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 A0A1W2PPM1 405 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 CD8B2A6NJW9 211 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 TTC36A6NLP5 189 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 MYO1GB0I1T2 1018 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 PLIN3O60664 434 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 RSL1D1O76021 490 aaKnown RBP8.54□□□□□ -1.04
YBX3-218ENST00000546298 CYP4B1P13584 511 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 IL12BP29460 328 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 NTSP30990 170 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 SRD5A2P31213 254 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 SOX18P35713 384 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 KIR2DL3P43628 341 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 SLCO1A2P46721 670 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 ASCL1P50553 236 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 NCBP2P52298 156 aaKnown RBP eCLIP8.54□□□□□ -1.04
YBX3-218ENST00000546298 PNLIPRP2P54317 469 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 KRTAP10-9P60411 292 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 DUSP2Q05923 314 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 SH2D5Q6ZV89 423 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 SEM1Q6ZVN7 128 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 IKBIPQ70UQ0 350 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 LARP4Q71RC2 724 aaKnown RBP eCLIP8.54□□□□□ -1.044e-6■■□□□ 12.8
YBX3-218ENST00000546298 TRIM46Q7Z4K8 759 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 YRDCQ86U90 279 aaKnown RBP8.54□□□□□ -1.04
YBX3-218ENST00000546298 TMEM200AQ86VY9 491 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 KIF18BQ86Y91 864 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 PLCZ1Q86YW0 608 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 FAM83FQ8NEG4 500 aaPredicted RBP8.54□□□□□ -1.04
YBX3-218ENST00000546298 OR14L1PQ8NHC6 308 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 CDC26Q8NHZ8 85 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 ZPLD1Q8TCW7 415 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 WDYHV1Q96HA8 205 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 VSTM2LQ96N03 204 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms