RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 BTNL2Q9UIR0 455 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 TO15178 435 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 SORBS2O94875 1100 aaKnown RBP18.89■□□□□ 0.62
HMGA2-211ENST00000545998 FBXO45P0C2W1 286 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 PRKAG1P54619 331 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 CORO7P57737 925 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 GNGT1P63211 74 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 PRR5P85299 388 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 ZNF791Q3KP31 576 aaPredicted RBP18.89■□□□□ 0.62
HMGA2-211ENST00000545998 NPSR1Q6W5P4 371 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 FUNDC1Q8IVP5 155 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 OR4A15Q8NGL6 344 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 SFXN5Q8TD22 340 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 C10orf82Q8WW14 230 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 HOXB13Q92826 284 aaPredicted RBP18.89■□□□□ 0.62
HMGA2-211ENST00000545998 HSPBAP1Q96EW2 488 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 SCMH1Q96GD3 660 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 EQTNQ9NQ60 294 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 ZCCHC3Q9NUD5 404 aaKnown RBP18.89■□□□□ 0.62
HMGA2-211ENST00000545998 TMEM45AQ9NWC5 275 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 LUZP4Q9P127 313 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 PCDHGB6Q9Y5F9 930 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 PCDHGA10Q9Y5H3 936 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 NPFFR2Q9Y5X5 522 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 ZNF462Q96JM2 2506 aa18.89■□□□□ 0.62
HMGA2-211ENST00000545998 EIF4E1BA6NMX2 242 aaKnown RBP18.89■□□□□ 0.61
HMGA2-211ENST00000545998 SLC25A12O75746 678 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 ABCD3P28288 659 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 MAP3K8P41279 467 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 CCT3P49368 545 aaKnown RBP18.89■□□□□ 0.61
HMGA2-211ENST00000545998 NRG3P56975 720 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 PSG6Q00889 435 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 RCAN2Q14206 197 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 ZNF766Q5HY98 468 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 SZRD1Q7Z422 152 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 MDGA2Q7Z553 956 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 DND1Q8IYX4 353 aaKnown RBP18.89■□□□□ 0.61
HMGA2-211ENST00000545998 SPACA9Q96E40 222 aaPredicted RBP18.89■□□□□ 0.61
HMGA2-211ENST00000545998 LMF2Q9BU23 707 aaKnown RBP18.89■□□□□ 0.61
HMGA2-211ENST00000545998 HES7Q9BYE0 225 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 PCDHGB4Q9UN71 923 aa18.89■□□□□ 0.61
HMGA2-211ENST00000545998 GMNCA6NCL1 334 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 CPSF4O95639 269 aaKnown RBP18.88■□□□□ 0.61
HMGA2-211ENST00000545998 SP1P08047 785 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 DRD4P21917 467 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 LRRC74AQ0VAA2 488 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 SPDYE7PQ495Y7 208 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 TIGD2Q4W5G0 525 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 BLOC1S3Q6QNY0 202 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 MSANTD1Q6ZTZ1 278 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 WDR53Q7Z5U6 358 aaPredicted RBP18.88■□□□□ 0.61
HMGA2-211ENST00000545998 SLC44A2Q8IWA5 706 aaPredicted RBP18.88■□□□□ 0.61
HMGA2-211ENST00000545998 OR56A1Q8NGH5 318 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 GOT1L1Q8NHS2 421 aaPredicted RBP18.88■□□□□ 0.61
HMGA2-211ENST00000545998 VPS33AQ96AX1 596 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 MOAP1Q96BY2 351 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 SGCZQ96LD1 299 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 RABEP2Q9H5N1 569 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 SERHLQ9NQF3 203 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 CCDC167Q9P0B6 97 aa18.88■□□□□ 0.61
HMGA2-211ENST00000545998 SUV39H1O43463 412 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 HMGN2P05204 90 aaKnown RBP18.87■□□□□ 0.61
HMGA2-211ENST00000545998 CD46P15529 392 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 SOAT1P35610 550 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 NTRK2Q16620 822 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 MAPKAPK3Q16644 382 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 AGKQ53H12 422 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 EXOSC6Q5RKV6 272 aaKnown RBP18.87■□□□□ 0.61
HMGA2-211ENST00000545998 SLC25A25Q6KCM7 469 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 MFSD12Q6NUT3 480 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 RPUSD3Q6P087 351 aaKnown RBP18.87■□□□□ 0.61
HMGA2-211ENST00000545998 ZCCHC12Q6PEW1 402 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 RTL4Q6ZR62 310 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 PRR22Q8IZ63 422 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 CPSF7Q8N684 471 aaKnown RBP18.87■□□□□ 0.61
HMGA2-211ENST00000545998 CDRT4Q8N9R6 151 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 GOLM1Q8NBJ4 401 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 OR5AK3PQ8NH89 298 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 TMEM125Q96AQ2 219 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 C16orf58Q96GQ5 468 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 C5orf34Q96MH7 638 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 SH2D2AQ9NP31 389 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 SLC52A3Q9NQ40 469 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 KLHL1Q9NR64 748 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 GPATCH2Q9NW75 528 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 MAP10Q9P2G4 905 aa18.87■□□□□ 0.61
HMGA2-211ENST00000545998 TTC36A6NLP5 189 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 B8ZZF3 427 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 NME2P1O60361 137 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 CD1EP15812 388 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 NAGAP17050 411 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 NME2P22392 152 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 PSPHP78330 225 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 ZNHIT3Q15649 155 aaPredicted RBP18.86■□□□□ 0.61
HMGA2-211ENST00000545998 SLC34A3Q8N130 599 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 OR4N2Q8NGD1 307 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 OMA1Q96E52 524 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 INPP5KQ9BT40 448 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 TIMMDC1Q9NPL8 285 aa18.86■□□□□ 0.61
HMGA2-211ENST00000545998 CAPN14A8MX76 684 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms