RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 NNATQ16517 81 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 FBXL19-AS1Q494R0 122 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 GGTA1PQ4G0N0 100 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 TRMT12Q53H54 448 aaKnown RBP7.72□□□□□ -1.17
USP28-215ENST00000545608 NHSL2Q5HYW2 709 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 NSUN5P2Q63ZY6 315 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 C8orf74Q6P047 294 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 FAM180BQ6P0A1 224 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 SLC48A1Q6P1K1 146 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 LETMD1Q6P1Q0 360 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ANGPTL8Q6UXH0 198 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 PAGE2Q7Z2X7 111 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 NUP54Q7Z3B4 507 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 COMMD6Q7Z4G1 85 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 YRDCQ86U90 279 aaKnown RBP7.72□□□□□ -1.17
USP28-215ENST00000545608 CDC20BQ86Y33 519 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 LACC1Q8IV20 430 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 PM20D2Q8IYS1 436 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 TMEM151AQ8N4L1 468 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 C17orf47Q8NEP4 570 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ADCY4Q8NFM4 1077 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 OR1J4Q8NGS1 313 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 TRPC4APQ8TEL6 797 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 SELENOMQ8WWX9 145 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 NINJ1Q92982 152 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 HGDQ93099 445 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ABTB1Q969K4 478 aaPredicted RBP7.72□□□□□ -1.17
USP28-215ENST00000545608 TRIB1Q96RU8 372 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 FOXC2Q99958 501 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 RSRP1Q9BUV0 290 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ITPAQ9BY32 194 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 BRINP2Q9C0B6 783 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 CLEC4MQ9H2X3 399 aaPredicted RBP7.72□□□□□ -1.17
USP28-215ENST00000545608 CDC42EP4Q9H3Q1 356 aaKnown RBP7.72□□□□□ -1.17
USP28-215ENST00000545608 ELOVL6Q9H5J4 265 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 MAT2BQ9NZL9 334 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ZNF629Q9UEG4 869 aaPredicted RBP7.72□□□□□ -1.17
USP28-215ENST00000545608 FETUBQ9UGM5 382 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 BCAP29Q9UHQ4 241 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ZNF639Q9UID6 485 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ST6GALNAC2Q9UJ37 374 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ZNF225Q9UK10 706 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 CBLCQ9ULV8 474 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 SLC12A4Q9UP95 1085 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 PLEKHA6Q9Y2H5 1048 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 DCHS2Q6V1P9 2916 aa7.72□□□□□ -1.17
USP28-215ENST00000545608 ADGRG4Q8IZF6 3080 aa7.71□□□□□ -1.17
USP28-215ENST00000545608 MBD3L4A6NDZ8 208 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 MBD3L3A6NE82 208 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 MBD3L5A6NJ08 208 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 CD8B2A6NJW9 211 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 A6NNC1 897 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 ICOSLGO75144 302 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 SMIM24O75264 130 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 UGT2B11O75310 529 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 GUCY1B2O75343 617 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 NME6O75414 186 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 OR4F21O95013 312 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 CBX7O95931 251 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 ATP1B1P05026 303 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 COL6A2P12110 1019 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 NAGAP17050 411 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 KRT15P19012 456 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 CSNK2A2P19784 350 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 TACR1P25103 407 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 CTSSP25774 331 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 PEX19P40855 299 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 SLCO1A2P46721 670 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 SERPINB9P50453 376 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 DAZAP2Q15038 168 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 LTB4RQ15722 352 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 CEBPEQ15744 281 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 FLYWCH1Q4VC44 716 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 TCHHL1Q5QJ38 904 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 C10orf62Q5T681 223 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 C6orf163Q5TEZ5 329 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 TMEM81Q6P7N7 255 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 VWA5B2Q8N398 1253 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 C1orf52Q8N6N3 182 aaKnown RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 C9orf106Q8NAJ2 232 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 FAM83FQ8NEG4 500 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 OR52R1Q8NGF1 315 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 MBD3L2Q8NHZ7 208 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 UHMK1Q8TAS1 419 aaKnown RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 LINC01560Q8TB33 94 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 ZNF483Q8TF39 744 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 FAM222BQ8WU58 562 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 DCAKDQ8WVC6 231 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 CTHRC1Q96CG8 243 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 OMA1Q96E52 524 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 HSPBAP1Q96EW2 488 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 CNRIP1Q96F85 164 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 LCORQ96JN0 433 aaPredicted RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 ZNF681Q96N22 645 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 HBEGFQ99075 208 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 PAFAH2Q99487 392 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 MRPL57Q9BQC6 102 aaKnown RBP7.71□□□□□ -1.18
USP28-215ENST00000545608 METTL7AQ9H8H3 244 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 GALNT9Q9HCQ5 603 aa7.71□□□□□ -1.18
USP28-215ENST00000545608 SERHLQ9NQF3 203 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms