RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TMEM107Q6UX40 140 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 MAMDC2Q7Z304 686 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 CHERPQ8IWX8 916 aaKnown RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 SLC34A3Q8N130 599 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 ANKRD42Q8N9B4 389 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 FNDC5Q8NAU1 212 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 CLHC1Q8NHS4 586 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 ZFP28Q8NHY6 868 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 FAM57AQ8TBR7 257 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 TUBGCP3Q96CW5 907 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 ZBED6CLQ96FA7 236 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 CCDC120Q96HB5 630 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 ZNF597Q96LX8 424 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 VSTM2LQ96N03 204 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 RILPQ96NA2 401 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 ANGPTL4Q9BY76 406 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 LDAHQ9H6V9 325 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 METTL7AQ9H8H3 244 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 FOLH1BQ9HBA9 442 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 PROK2Q9HC23 129 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 C19orf53Q9UNZ5 99 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 RAP2CQ9Y3L5 183 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 USP9XQ93008 2570 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 TMEM120BA0PK00 339 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 OR14I1A6ND48 311 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 ZNHIT1O43257 154 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 ABCB7O75027 752 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 TRIM3O75382 744 aaPredicted RBP14.43□□□□□ -0.1
CCDC78-216ENST00000544996 REM1O75628 298 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 IGHG3P01860 377 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 CT45A8P0DMV1 189 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 CT45A9P0DMV2 189 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 BGNP21810 368 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 GPC1P35052 558 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 CASP3P42574 277 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 RPL14P50914 215 aaKnown RBP14.43□□□□□ -0.1
CCDC78-216ENST00000544996 MAGOHP61326 146 aaKnown RBP14.43□□□□□ -0.1
CCDC78-216ENST00000544996 ZNF155Q12901 538 aaPredicted RBP14.43□□□□□ -0.1
CCDC78-216ENST00000544996 ZNHIT3Q15649 155 aaPredicted RBP14.43□□□□□ -0.1
CCDC78-216ENST00000544996 CT45A2Q5DJT8 189 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 C6orf136Q5SQH8 315 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 ANKRD26P1Q6NSI1 321 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 RPTNQ6XPR3 784 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 FGD2Q7Z6J4 655 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 DOLPP1Q86YN1 238 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 OR2L13Q8N349 312 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 ZNF781Q8N8C0 355 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 TMBIM1Q969X1 311 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 TMCO6Q96DC7 493 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 ELP4Q96EB1 424 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 C3orf30Q96M34 536 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 COL21A1Q96P44 957 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 EXO5Q9H790 373 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 QPCTLQ9NXS2 382 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 NKIRAS1Q9NYS0 192 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 EIF3LQ9Y262 564 aaKnown RBP14.43□□□□□ -0.1
CCDC78-216ENST00000544996 MEMO1Q9Y316 297 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 OR10H1Q9Y4A9 318 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 COL12A1Q99715 3063 aa14.43□□□□□ -0.1
CCDC78-216ENST00000544996 HECTD1Q9ULT8 2610 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 DOPEY2Q9Y3R5 2298 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 OR6C70A6NIJ9 312 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 E9PLN8 166 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 UPK1AO00322 258 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 SUSD5O60279 629 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 NME6O75414 186 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 IFI6P09912 130 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 PRPS2P11908 318 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 IL12BP29460 328 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 MAN2A2P49641 1150 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 SMSP52788 366 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 SLC18A1P54219 525 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 MANFP55145 182 aaKnown RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 CORO7P57737 925 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 MRPS22P82650 360 aaKnown RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 HSPB3Q12988 150 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 MAD2L1Q13257 205 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 PDE7AQ13946 482 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 CASP8Q14790 479 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 IL23RQ5VWK5 629 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 CES4AQ5XG92 561 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 BICRALQ6AI39 1079 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 SLC30A6Q6NXT4 461 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 TRILQ7L0X0 811 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 ZNF551Q7Z340 670 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 CD163Q86VB7 1156 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 SLC44A2Q8IWA5 706 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 LIX1Q8N485 282 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 CIDECQ96AQ7 238 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 PRPF18Q99633 342 aaKnown RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 VKORC1Q9BQB6 163 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 C1orf50Q9BV19 199 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 ZNF703Q9H7S9 590 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 ZNF395Q9H8N7 513 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 TMBIM4Q9HC24 238 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 ACSS1Q9NUB1 689 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-216ENST00000544996 KLRF1Q9NZS2 232 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 GIMAP2Q9UG22 337 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 HIVEP3Q5T1R4 2406 aa14.42□□□□□ -0.1
CCDC78-216ENST00000544996 TRGV5A0A0B4J1U4 118 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms