RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 AK1P00568 194 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 PVRP15151 417 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 PSMA6P60900 246 aaKnown RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 FAM189A2Q15884 450 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ASRGL1Q7L266 308 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 CYB561A3Q8NBI2 242 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 TOE1Q96GM8 510 aaKnown RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 ZNF701Q9NV72 531 aaPredicted RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 CD207Q9UJ71 328 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 A6NCN8 305 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ANTXRLA6NF34 631 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 SLC22A31A6NKX4 558 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 VSTM5A8MXK1 200 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 OXSR1O95747 527 aaPredicted RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 YES1P07947 543 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 DRD1P21728 446 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 STT3AP46977 705 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 HLCSP50747 726 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 HERV-K104P61576 105 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ZSCAN4Q8NAM6 433 aaPredicted RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 TMEM185BQ9H7F4 350 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 RMI1Q9H9A7 625 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 PREBQ9HCU5 417 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 MAS1P04201 325 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 GTF2F2P13984 249 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 SNU13P55769 128 aaKnown RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 ACTC1P68032 377 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ACTA1P68133 377 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ELOAQ14241 798 aaKnown RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 IRF4Q15306 451 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 OR5L2Q8NGL0 311 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 FCAMRQ8WWV6 532 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 RFT1Q96AA3 541 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 BORCS8Q96FH0 119 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 PGAM5Q96HS1 289 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 SLC22A12Q96S37 553 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 DPH1Q9BZG8 443 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 SCP2D1Q9UJQ7 156 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 MTNR1AP48039 350 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 CTXN1P60606 82 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 SRYQ05066 204 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 TMEM31Q5JXX7 168 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 PNCKQ6P2M8 343 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 TMEM151BQ8IW70 566 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 SAMD8Q96LT4 415 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 NELL2Q99435 816 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 PITX2Q99697 317 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 CWH43Q9H720 699 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 HEBP1Q9NRV9 189 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 DNMT3BQ9UBC3 853 aaKnown RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 INMT-MINDY4F8WBC2 141 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 GPX3P22352 226 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 HOXD9P28356 352 aaPredicted RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 CDKN2CP42773 168 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 RPS15P62841 145 aaKnown RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 HOXC5Q00444 222 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 DEFA5Q01523 94 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 TCTE1Q5JU00 501 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ALKAL1Q6UXT8 129 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 TOR1AIP2Q8NFQ8 470 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ZNF431Q8TF32 576 aaPredicted RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 ZNF559Q9BR84 538 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 FUNDC2Q9BWH2 189 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ZNF700Q9H0M5 742 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 ARMC1Q9NVT9 282 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 HPF1Q9NWY4 346 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 MRPL15Q9P015 296 aaKnown RBP12.14□□□□□ -0.47
CHD4-211ENST00000544484 HSPB11Q9Y547 144 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 DISC1C4P0D8 188 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 M0R129 80 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 MAGEA6P43360 314 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 NCS1P62166 190 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 GRK1Q15835 563 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 MPP7Q5T2T1 576 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ARHGAP11AQ6P4F7 1023 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ZER1Q7Z7L7 766 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 GAL3ST3Q96A11 431 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ISG20Q96AZ6 181 aaKnown RBP12.13□□□□□ -0.47
CHD4-211ENST00000544484 CPNE2Q96FN4 548 aaPredicted RBP12.13□□□□□ -0.47
CHD4-211ENST00000544484 SLC29A1Q99808 456 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 KCNK13Q9HB14 408 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 KCNJ13O60928 360 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 SLC7A9P82251 487 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 CTSL3PQ5NE16 218 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ACOT4Q8N9L9 421 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 NWD2Q9ULI1 1742 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
CHD4-211ENST00000544484 OR7A10O76100 309 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 PPP1R3DO95685 299 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 GKN3PP0CG01 181 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 LHCGRP22888 699 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ERVFC1P60507 584 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 BEND4Q6ZU67 534 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 LRRC20Q8TCA0 184 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 CNN2Q99439 309 aaKnown RBP12.13□□□□□ -0.47
CHD4-211ENST00000544484 FBRSQ9HAH7 460 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms