RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 MED25Q71SY5 747 aa18.52■□□□□ 0.55
COPS7A-218ENST00000543939 COMTD1Q86VU5 262 aa18.52■□□□□ 0.55
COPS7A-218ENST00000543939 GPR135Q8IZ08 494 aa18.52■□□□□ 0.55
COPS7A-218ENST00000543939 VWA5B2Q8N398 1253 aa18.52■□□□□ 0.55
COPS7A-218ENST00000543939 CDRT4Q8N9R6 151 aa18.52■□□□□ 0.55
COPS7A-218ENST00000543939 ZNF501Q96CX3 271 aaPredicted RBP18.52■□□□□ 0.55
COPS7A-218ENST00000543939 ALOXE3Q9BYJ1 711 aa18.52■□□□□ 0.55
COPS7A-218ENST00000543939 ACER3Q9NUN7 267 aa18.52■□□□□ 0.55
COPS7A-218ENST00000543939 MAU2Q9Y6X3 613 aa18.52■□□□□ 0.55
COPS7A-218ENST00000543939 A8MVJ9 347 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 HYAL3O43820 417 aaPredicted RBP18.51■□□□□ 0.55
COPS7A-218ENST00000543939 ZIC2O95409 532 aaPredicted RBP18.51■□□□□ 0.55
COPS7A-218ENST00000543939 EPPINO95925 133 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 RPLP0P05388 317 aaKnown RBP18.51■□□□□ 0.55
COPS7A-218ENST00000543939 SYPP08247 313 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 IGFBP5P24593 272 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 HMGA2P52926 109 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 PDX1P52945 283 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 RAD23AP54725 363 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 CDH12P55289 794 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 KCNAB2Q13303 367 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 PRAMEF17Q5VTA0 474 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 ISLR2Q6UXK2 745 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 ARHGAP22Q7Z5H3 698 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 GALNT12Q8IXK2 581 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 OR4D11Q8NGI4 311 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 HOXB13Q92826 284 aaPredicted RBP18.51■□□□□ 0.55
COPS7A-218ENST00000543939 STACQ99469 402 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 PINK1Q9BXM7 581 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 LRRN3Q9H3W5 708 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 FGF21Q9NSA1 209 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 KCND3Q9UK17 655 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 ORC6Q9Y5N6 252 aa18.51■□□□□ 0.55
COPS7A-218ENST00000543939 NUP210LQ5VU65 1888 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 MITFO75030 526 aaPredicted RBP18.5■□□□□ 0.55
COPS7A-218ENST00000543939 LGI1O95970 557 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 ALOX5P09917 674 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 ALAS2P22557 587 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 OR1D4P47884 311 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 LIMS1P48059 325 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 DUSP8Q13202 625 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 YOD1Q5VVQ6 348 aaPredicted RBP18.5■□□□□ 0.55
COPS7A-218ENST00000543939 MLIPQ5VWP3 458 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 TTC23Q5W5X9 447 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 OFCC1Q8IZS5 231 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 OR4D9Q8NGE8 314 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 RBM18Q96H35 190 aaKnown RBP18.5■□□□□ 0.55
COPS7A-218ENST00000543939 WFDC6Q9BQY6 131 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 NDC1Q9BTX1 674 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 QRSL1Q9H0R6 528 aaKnown RBP18.5■□□□□ 0.55
COPS7A-218ENST00000543939 DUSP22Q9NRW4 184 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 LANCL2Q9NS86 450 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 DHCR7Q9UBM7 475 aaKnown RBP18.5■□□□□ 0.55
COPS7A-218ENST00000543939 NDOR1Q9UHB4 597 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 GMEB2Q9UKD1 530 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 CDC14AQ9UNH5 594 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 BDP1A6H8Y1 2624 aa18.5■□□□□ 0.55
COPS7A-218ENST00000543939 OR2W5A6NFC9 320 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 A6NHS1 94 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 FFAR1O14842 300 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 DSCR3O14972 297 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 FCMRO60667 390 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 COQ9O75208 318 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 SEMA7AO75326 666 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 JRKO75564 520 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 ALPPP05187 535 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 PABPC4LP0CB38 370 aaKnown RBP18.49■□□□□ 0.55
COPS7A-218ENST00000543939 CKMT1AP12532 417 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 MAOAP21397 527 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 PIGAP37287 484 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 STT3AP46977 705 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 ANGPT1Q15389 498 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 LPAL2Q16609 132 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 PROX2Q3B8N5 592 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 TCTN3Q6NUS6 607 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 FRRS1Q6ZNA5 592 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 HMGN2P46Q86SG4 172 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 LACC1Q8IV20 430 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 CHDHQ8NE62 594 aaPredicted RBP18.49■□□□□ 0.55
COPS7A-218ENST00000543939 OR52R1Q8NGF1 315 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 GIPC3Q8TF64 312 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.49■□□□□ 0.55
COPS7A-218ENST00000543939 RIT1Q92963 219 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 ZG16BQ96DA0 208 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 DGAT2Q96PD7 388 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 SDF2Q99470 211 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 FANCEQ9HB96 536 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 FER1L5A0AVI2 2057 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 SMIM18P0DKX4 95 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 ITGAMP11215 1152 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 FUT4P22083 530 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 AVPR2P30518 371 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 HPCAP84074 193 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 EXOC3L2Q2M3D2 409 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 RBM45Q8IUH3 476 aaKnown RBP18.49■□□□□ 0.55
COPS7A-218ENST00000543939 PIK3C3Q8NEB9 887 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 ZNF555Q8NEP9 628 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 OR52J3Q8NH60 311 aa18.49■□□□□ 0.55
COPS7A-218ENST00000543939 VANGL1Q8TAA9 524 aaPredicted RBP18.49■□□□□ 0.55
COPS7A-218ENST00000543939 MUS81Q96NY9 551 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms