RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 GPR137CQ8N3F9 429 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 LINC01465Q8N7H1 131 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF283Q8N7M2 679 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ARRDC3Q96B67 414 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 DGCR14Q96DF8 476 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 CCNL2Q96S94 520 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TRPV5Q9NQA5 729 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TAS2R7Q9NYW3 318 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 RHCGQ9UBD6 479 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 MGAT4BQ9UQ53 548 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 DDX60Q8IY21 1712 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SMCO3A2RU48 225 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 EFCAB7A8K855 629 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SDHDO14521 159 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 QDPRP09417 244 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PABPC4LP0CB38 370 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF888P0CJ79 500 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PVRP15151 417 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 CERS1P27544 350 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 OR1E2P47887 323 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 CLDN8P56748 225 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 RBPJQ06330 500 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 DLX2Q07687 328 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 VMACQ2NL98 169 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 IER5LQ5T953 404 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ATG9BQ674R7 924 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 VHLLQ6RSH7 139 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ARL9Q6T311 187 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 MARVELD2Q8N4S9 558 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 LINC00469Q8N7U9 141 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF596Q8TC21 504 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 FANK1Q8TC84 345 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SGCDQ92629 289 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 RHBDF1Q96CC6 855 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 DOHHQ9BU89 302 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 B3GNT4Q9C0J1 378 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 MLXQ9UH92 298 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PCTPQ9UKL6 214 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 MMP17Q9ULZ9 603 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 MYH4Q9Y623 1939 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TOGARAM1Q9Y4F4 1720 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 LOC285095A0A1B0GVY8 99 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TLX2O43763 284 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 NUAK1O60285 661 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TRMUO75648 421 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 GOSR1O95249 250 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 RPLP0P05388 317 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 RNF144AP50876 292 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 RPS26P62854 115 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 GRB7Q14451 532 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SPATS1Q496A3 300 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 KHDC1Q4VXA5 237 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 GTF2IRD2BQ6EKJ0 949 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ENPP6Q6UWR7 440 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 GTF2IRD2Q86UP8 949 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 JAGN1Q8N5M9 183 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 OR8J3Q8NGG0 315 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 C9orf43Q8TAL5 461 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ARRDC2Q8TBH0 407 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 DNAJA3Q96EY1 480 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TMEM168Q9H0V1 697 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 CXCL16Q9H2A7 254 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SP140LQ9H930 580 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PCDHB16Q9NRJ7 776 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 AIG1Q9NVV5 245 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 MKLN1Q9UL63 735 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PCDHGA6Q9Y5G7 932 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 NRAPQ86VF7 1730 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 FAM240BA0A1B0GVZ2 78 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TTLL8A6PVC2 850 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SGK494L7N484 410 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ABLIM1O14639 778 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TSPAN4O14817 238 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 HOXC11O43248 304 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TYROBPO43914 113 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SCRG1O75711 98 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 RAB36O95755 333 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 DHFRP00374 187 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 HCKP08631 526 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 MAZP56270 477 aaKnown RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 RGS21Q2M5E4 152 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CES4AQ5XG92 561 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NANOGP8Q6NSW7 305 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 KCTD18Q6PI47 426 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF551Q7Z340 670 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CDH26Q8IXH8 852 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SPARTQ8N0X7 666 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 VWA5B2Q8N398 1253 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 LRRC17Q8N6Y2 441 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 MFSD2AQ8NA29 543 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TMEM104Q8NE00 496 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NLGN4YQ8NFZ3 816 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 OR6N2Q8NGY6 317 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 OR51A7Q8NH64 312 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 C16orf78Q8WTQ4 265 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CCDC86Q9H6F5 360 aaKnown RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NANOGQ9H9S0 305 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NANSQ9NR45 359 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms