RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ATAD3BQ5T9A4 648 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ZNF574Q6ZN55 896 aaPredicted RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 TSEN54Q7Z6J9 526 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 TMEM179BQ7Z7N9 219 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 STK32CQ86UX6 486 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 SATL1Q86VE3 508 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 GPR135Q8IZ08 494 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ST13P4Q8IZP2 240 aaPredicted RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 OR51Q1Q8NH59 317 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ZNF300Q96RE9 604 aaPredicted RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 ADI1Q9BV57 179 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 RBCK1Q9BYM8 510 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 REEP1Q9H902 201 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ANKRA2Q9H9E1 313 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 EQTNQ9NQ60 294 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 EXD2Q9NVH0 621 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 NDUFAF4Q9P032 175 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 SERTAD3Q9UJW9 196 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 GMEB2Q9UKD1 530 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 CDC14AQ9UNH5 594 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 TMA7Q9Y2S6 64 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 TMEM184BQ9Y519 407 aaPredicted RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 PCDHGA5Q9Y5G8 931 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 PRAMEF25A6NGN4 478 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 A8MU76 341 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 DSCR3O14972 297 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 ADAMDEC1O15204 470 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 OR10H2O60403 315 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 DNAJB5O75953 348 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 RECKO95980 971 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 ZNF883P0CG24 379 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 GALNSP34059 522 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 DUSP3P51452 185 aaPredicted RBP8.71□□□□□ -1.01
GNE-206ENST00000543356 ARHGDIAP52565 204 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 MERTKQ12866 999 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 SLC13A2Q13183 592 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 SLC36A3Q495N2 470 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 TRMT12Q53H54 448 aaKnown RBP8.71□□□□□ -1.01
GNE-206ENST00000543356 OTUD3Q5T2D3 398 aaPredicted RBP8.71□□□□□ -1.01
GNE-206ENST00000543356 UGT2A3Q6UWM9 527 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 Q6ZNX1 250 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 TMPRSS9Q7Z410 1059 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 GPR32P1Q8NGA4 272 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 OR2I1PQ8NGU4 316 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 IFI44Q8TCB0 444 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 ADAMTS15Q8TE58 950 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 HOXB13Q92826 284 aaPredicted RBP8.71□□□□□ -1.01
GNE-206ENST00000543356 OTUB1Q96FW1 271 aaPredicted RBP8.71□□□□□ -1.01
GNE-206ENST00000543356 ZNF354BQ96LW1 612 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 COL21A1Q96P44 957 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 OR1F2PQ96R84 312 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 STACQ99469 402 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 PELOQ9BRX2 385 aaKnown RBP8.71□□□□□ -1.01
GNE-206ENST00000543356 NDC1Q9BTX1 674 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 PTTG2Q9NZH5 202 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 SEC14L3Q9UDX4 400 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 ATXN7L1Q9ULK2 861 aaPredicted RBP8.71□□□□□ -1.01
GNE-206ENST00000543356 CLDN16Q9Y5I7 305 aa8.71□□□□□ -1.01
GNE-206ENST00000543356 GON4LQ3T8J9 2241 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 H0YAE9 185 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 TGFBR3LH3BV60 316 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 CASC3O15234 703 aaKnown RBP8.71□□□□□ -1.02
GNE-206ENST00000543356 IFNW1P05000 195 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 THRBP10828 461 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 ACP2P11117 423 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 MPLP40238 635 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 XCR1P46094 333 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 STT3AP46977 705 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 ACY1Q03154 408 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 STX4Q12846 297 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 EPS8Q12929 822 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 DCTN2Q13561 401 aaKnown RBP8.71□□□□□ -1.02
GNE-206ENST00000543356 COL9A2Q14055 689 aaPredicted RBP8.71□□□□□ -1.02
GNE-206ENST00000543356 DSG2Q14126 1118 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 DUSP7Q16829 419 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 SYT16Q17RD7 645 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 GPAT3Q53EU6 434 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 TTLL10Q6ZVT0 673 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 C16orf62Q7Z3J2 963 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 ZNF605Q86T29 641 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 GALNT12Q8IXK2 581 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 VWA5B2Q8N398 1253 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 METTL27Q8N6F8 245 aaPredicted RBP8.71□□□□□ -1.02
GNE-206ENST00000543356 CDRT4Q8N9R6 151 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 C7orf57Q8NEG2 295 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 PROX1Q92786 737 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 SLC35A4Q96G79 324 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 CNBD2Q96M20 576 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 ZNF578Q96N58 590 aaPredicted RBP8.71□□□□□ -1.02
GNE-206ENST00000543356 NDEL1Q9GZM8 345 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 PIGUQ9H490 435 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 CXorf21Q9HAI6 301 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 FGF21Q9NSA1 209 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 SATB2Q9UPW6 733 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 CARD8Q9Y2G2 431 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 SAMHD1Q9Y3Z3 626 aaKnown RBP8.71□□□□□ -1.02
GNE-206ENST00000543356 MMACHCQ9Y4U1 282 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 PCDHGB3Q9Y5G1 929 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 PCDHGB2Q9Y5G2 931 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 MAGED1Q9Y5V3 778 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms