RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 NINJ2Q9NZG7 142 aa15.85■□□□□ 0.13
PPP1CA-210ENST00000542876 ZNF639Q9UID6 485 aa15.85■□□□□ 0.13
PPP1CA-210ENST00000542876 FRG2CA6NGY1 282 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 CASKO14936 926 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 ABCB7O75027 752 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 REM1O75628 298 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 BCAS2O75934 225 aaPredicted RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 CBX7O95931 251 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 KRT20P35900 424 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 DIO3P55073 304 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 ETF1P62495 437 aaKnown RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 EEF1A1P68104 462 aaKnown RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 CKAP4Q07065 602 aaKnown RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 GALNT1Q10472 559 aaPredicted RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 GAB1Q13480 694 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 TRMT12Q53H54 448 aaKnown RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 EEF1A1P5Q5VTE0 462 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 SYT10Q6XYQ8 523 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 LUZP2Q86TE4 346 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 PLCZ1Q86YW0 608 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 TRIM42Q8IWZ5 723 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 MMP21Q8N119 569 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 C1orf52Q8N6N3 182 aaKnown RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 SLC44A1Q8WWI5 657 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 WNT2BQ93097 391 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 ISL2Q96A47 359 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 INTS12Q96CB8 462 aaKnown RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 CTHRC1Q96CG8 243 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 DACH2Q96NX9 599 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 COL21A1Q96P44 957 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 LRRC1Q9BTT6 524 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 OR2B2Q9GZK3 357 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 MRPL46Q9H2W6 279 aaKnown RBP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 PIGMQ9H3S5 423 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 NEUROD4Q9HD90 331 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 TAS2R10Q9NYW0 307 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 UTS2RQ9UKP6 389 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 NIPBLQ6KC79 2804 aaeCLIP15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 NAV3Q8IVL0 2385 aa15.84■□□□□ 0.13
PPP1CA-210ENST00000542876 OR6C70A6NIJ9 312 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 TO15178 435 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 RCBTB2O95199 551 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 RPS17P08708 135 aaKnown RBP15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 DRD2P14416 443 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 PCSK2P16519 638 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 CHMP24386 653 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 PTGDSP41222 190 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 MAGEA12P43365 314 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 SLCO1A2P46721 670 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 CDH13P55290 713 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 MRPS35P82673 323 aaKnown RBP15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 FOXF2Q12947 444 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 LTB4RQ15722 352 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 ZNF572Q7Z3I7 529 aaPredicted RBP15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 SAMD14Q8IZD0 417 aaPredicted RBP15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 WDSUB1Q8N9V3 476 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 TMBIM1Q969X1 311 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 CNRIP1Q96F85 164 aaPredicted RBP15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 PAFAH2Q99487 392 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 TSPYL1Q9H0U9 437 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 GSX1Q9H4S2 264 aaPredicted RBP15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 PLEKHF2Q9H8W4 249 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 DLL4Q9NR61 685 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 GALNT8Q9NY28 637 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 VPS29Q9UBQ0 182 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 NDRG3Q9UGV2 375 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 TRPS1Q9UHF7 1281 aa15.83■□□□□ 0.12
PPP1CA-210ENST00000542876 SH3D21A4FU49 640 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 KRT6AP02538 564 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 KRT6BP04259 564 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 HOXB4P17483 251 aaPredicted RBP15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 SRD5A2P31213 254 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 SOX18P35713 384 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 KRT6CP48668 564 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 EMDP50402 254 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 PSPHP78330 225 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 HMGCS1Q01581 520 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 EFR3AQ14156 821 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 POU4F3Q15319 338 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 ERCC6LQ2NKX8 1250 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 FAM180BQ6P0A1 224 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 LETMD1Q6P1Q0 360 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 RPS27LQ71UM5 84 aaKnown RBP15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 CHMP1BQ7LBR1 199 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 GRAMD2AQ8IUY3 354 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 GCNT2Q8N0V5 402 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 SIMC1Q8NDZ2 872 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 ZNF483Q8TF39 744 aaPredicted RBP15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 ERP27Q96DN0 273 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 SFXN2Q96NB2 322 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 UCN2Q96RP3 112 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 ADOQ96SZ5 270 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 GIMAP4Q9NUV9 329 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 DKKL1Q9UK85 242 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 EIF3LQ9Y262 564 aaKnown RBP15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 GPR55Q9Y2T6 319 aaPredicted RBP15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 WIF1Q9Y5W5 379 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 ZNF469Q96JG9 3925 aaPredicted RBP15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 FREM3P0C091 2139 aa15.82■□□□□ 0.12
PPP1CA-210ENST00000542876 PPP6CO00743 305 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms