RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PRR14Q9BWN1 585 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 GTPBP2Q9BX10 602 aaKnown RBP12.17□□□□□ -0.46
DDX11-223ENST00000542838 ZCCHC3Q9NUD5 404 aaKnown RBP12.17□□□□□ -0.46
DDX11-223ENST00000542838 CUEDC1Q9NWM3 386 aaPredicted RBP12.17□□□□□ -0.46
DDX11-223ENST00000542838 HSPB11Q9Y547 144 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 A0A087WUU8 490 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 A0A0G2JN53 185 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 SHISA3A0PJX4 238 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 WASHC1A8K0Z3 465 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 C12orf71A8MTZ7 269 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 INMT-MINDY4F8WBC2 141 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 KPNA3O00505 521 aaPredicted RBP12.17□□□□□ -0.46
DDX11-223ENST00000542838 GABRPO00591 440 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 PQBP1O60828 265 aaKnown RBP12.17□□□□□ -0.46
DDX11-223ENST00000542838 UBXN7O94888 489 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 CRYZL1O95825 349 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 RB1P06400 928 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 PTBP1P26599 531 aaKnown RBP eCLIP12.17□□□□□ -0.463e-7■■■■□ 24.4
DDX11-223ENST00000542838 GPR1P46091 355 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 CDH11P55287 796 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 CTBP2P56545 445 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 RFPL4BQ6ZWI9 263 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 PRICKLE2Q7Z3G6 844 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 OR5H6Q8NGV6 325 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 RAET1EQ8TD07 263 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 GNPDA2Q8TDQ7 276 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 RAD51AP1Q96B01 352 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 MED30Q96HR3 178 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 AIF1LQ9BQI0 150 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 SPATA5L1Q9BVQ7 753 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 RHBGQ9H310 441 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 TAS2R7Q9NYW3 318 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 C2orf92A0A1B0GVN3 265 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 CD8B2A6NJW9 211 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 FAM170BA6NMN3 283 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 CH25HO95992 272 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 HLA-DPB1P04440 258 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 CD8BP10966 210 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 OR3A3P47888 321 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 LY6G5CQ5SRR4 150 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 NUDT13Q86X67 352 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 ZNF547Q8IVP9 402 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 SLC37A3Q8NCC5 494 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 ZNF485Q8NCK3 441 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 OR4M1Q8NGD0 313 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 BBS10Q8TAM1 723 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 KCNJ15Q99712 375 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 GLIPR2Q9H4G4 154 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 SPHK2Q9NRA0 654 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 CNIH4Q9P003 139 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 TEKT2Q9UIF3 430 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 ADAM30Q9UKF2 790 aa12.17□□□□□ -0.46
DDX11-223ENST00000542838 KDM4EB2RXH2 506 aaPredicted RBP12.16□□□□□ -0.46
DDX11-223ENST00000542838 RFXAPO00287 272 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 CHRM4P08173 479 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 KELP23276 732 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 PTGER1P34995 402 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 TAS2R41P59536 307 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 LAMTOR1Q6IAA8 161 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 ZNF767PQ75MW2 155 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 ARIH2OSQ8N7S6 290 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 SUN5Q8TC36 379 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 AKAP1Q92667 903 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDX11-223ENST00000542838 OTULINQ96BN8 352 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 LHX9Q9NQ69 397 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 ACSS1Q9NUB1 689 aaPredicted RBP12.16□□□□□ -0.46
DDX11-223ENST00000542838 SRRDQ9UH36 339 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 PRKAB1Q9Y478 270 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 LRRK1Q38SD2 2015 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 SGK494L7N484 410 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 EVI2BP34910 448 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 SP3Q02447 781 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 ADAM15Q13444 863 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 ZNF791Q3KP31 576 aaPredicted RBP12.16□□□□□ -0.46
DDX11-223ENST00000542838 KIAA1161Q6NSJ0 714 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 WASH2PQ6VEQ5 465 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 FAM83HQ6ZRV2 1179 aaPredicted RBP12.16□□□□□ -0.46
DDX11-223ENST00000542838 CREB3L2Q70SY1 520 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 C11orf96Q7Z7L8 435 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 ELMOD2Q8IZ81 293 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 KLHL36Q8N4N3 616 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 AMER3Q8N944 861 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 ANGPTL6Q8NI99 470 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 SMG7Q92540 1137 aaKnown RBP12.16□□□□□ -0.46
DDX11-223ENST00000542838 FAM46AQ96IP4 442 aaKnown RBP12.16□□□□□ -0.46
DDX11-223ENST00000542838 COQ10AQ96MF6 247 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 RNF32Q9H0A6 362 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 HDHD2Q9H0R4 259 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 DPEP2Q9H4A9 486 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 STMN3Q9NZ72 180 aa12.16□□□□□ -0.46
DDX11-223ENST00000542838 COL4A6Q14031 1691 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 TPD52L2O43399 206 aaKnown RBP12.15□□□□□ -0.46
DDX11-223ENST00000542838 AKAP8O43823 692 aaKnown RBP12.15□□□□□ -0.46
DDX11-223ENST00000542838 C8AP07357 584 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 CCR2P41597 374 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 KHKP50053 298 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 CSTF1Q05048 431 aaKnown RBP12.15□□□□□ -0.46
DDX11-223ENST00000542838 RIN1Q13671 783 aa12.15□□□□□ -0.46
DDX11-223ENST00000542838 DSG2Q14126 1118 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms