RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 C17orf62Q9BQA9 187 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 EFCAB11Q9BUY7 163 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 LGR4Q9BXB1 951 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 UCKL1Q9NWZ5 548 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 SLC23A2Q9UGH3 650 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 NTNG1Q9Y2I2 539 aa14.46□□□□□ -0.1
CNOT9-208ENST00000542068 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.45□□□□□ -0.1
CNOT9-208ENST00000542068 FAAHO00519 579 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 UQCRC1P31930 480 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 FAPQ12884 760 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 YIF1BQ5BJH7 314 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 SDE2Q6IQ49 451 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 SIMC1Q8NDZ2 872 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 OR51I1Q9H343 314 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 MYNNQ9NPC7 610 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 NOTCH4Q99466 2003 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 TRAV6A0A075B6T7 132 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 FAM183AA6NL82 134 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 CPSF4LA6NMK7 179 aaKnown RBP14.45□□□□□ -0.1
CNOT9-208ENST00000542068 PLPP1O14494 284 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 OR2B3O76000 313 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 WNT4P56705 351 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 MRPL28Q13084 256 aaKnown RBP14.45□□□□□ -0.1
CNOT9-208ENST00000542068 MEDAGQ5VYS4 303 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 SLC30A6Q6NXT4 461 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 RRM2BQ7LG56 351 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 DNAJC5GQ8N7S2 189 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 GOT1L1Q8NHS2 421 aaPredicted RBP14.45□□□□□ -0.1
CNOT9-208ENST00000542068 ZFPM2Q8WW38 1151 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 UFD1Q92890 307 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 RAD51AP1Q96B01 352 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 CLIP3Q96DZ5 547 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 PDXPQ96GD0 296 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 ZCCHC3Q9NUD5 404 aaKnown RBP14.45□□□□□ -0.1
CNOT9-208ENST00000542068 GSTK1Q9Y2Q3 226 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 SPEGQ15772 3267 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 DOCK9Q9BZ29 2069 aa14.45□□□□□ -0.1
CNOT9-208ENST00000542068 IQCMA0A1B0GVH7 501 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 SERTM1A2A2V5 107 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 HMGN4O00479 90 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 ADH1CP00326 375 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 ADRB3P13945 408 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 EVI2BP34910 448 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 LASP1Q14847 261 aaKnown RBP14.44□□□□□ -0.1
CNOT9-208ENST00000542068 IDNKQ5T6J7 187 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 DPPA4Q7L190 304 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 KRT74Q7RTS7 529 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 SLC37A3Q8NCC5 494 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 OR8H1Q8NGG4 311 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 KAT2AQ92830 837 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 TOX2Q96NM4 488 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 TEFMQ96QE5 360 aaKnown RBP14.44□□□□□ -0.1
CNOT9-208ENST00000542068 BEX1Q9HBH7 125 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 MAT2BQ9NZL9 334 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 PPIL1Q9Y3C6 166 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 SCN2AQ99250 2005 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 PIPP12273 146 aaPredicted RBP14.44□□□□□ -0.1
CNOT9-208ENST00000542068 SSR2P43308 183 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 C21orf58P58505 322 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 C12orf73Q69YU5 71 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 MTFR2Q6P444 385 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 RDH10Q8IZV5 341 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 TMEM145Q8NBT3 493 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 SUN5Q8TC36 379 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 UPRTQ96BW1 309 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 FAM46AQ96IP4 442 aaKnown RBP14.44□□□□□ -0.1
CNOT9-208ENST00000542068 LMLNQ96KR4 655 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 ZNF607Q96SK3 696 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 FZD3Q9NPG1 666 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 PRAMEF27A3QJZ7 478 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 OR52A4PA6NMU1 304 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 LYRM1O43325 122 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 IL1AP01583 271 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 PRKAR1AP10644 381 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 RPS5P46782 204 aaKnown RBP14.44□□□□□ -0.1
CNOT9-208ENST00000542068 RFX3P48380 749 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 SLC16A1P53985 500 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 ZNF234Q14588 700 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 ZNF77Q15935 545 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 CLPPQ16740 277 aaPredicted RBP14.44□□□□□ -0.1
CNOT9-208ENST00000542068 PSRC1Q6PGN9 363 aaPredicted RBP14.44□□□□□ -0.1
CNOT9-208ENST00000542068 VN1R5Q7Z5H4 357 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 AMIGO1Q86WK6 493 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 ZNF547Q8IVP9 402 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 KRT78Q8N1N4 520 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 GDPD1Q8N9F7 314 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 C12orf66Q96MD2 445 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 COQ7Q99807 217 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 SLA2Q9H6Q3 261 aa14.44□□□□□ -0.1
CNOT9-208ENST00000542068 MRPS7Q9Y2R9 242 aaKnown RBP14.44□□□□□ -0.1
CNOT9-208ENST00000542068 SHISA3A0PJX4 238 aa14.43□□□□□ -0.1
CNOT9-208ENST00000542068 ZC3H12DA2A288 527 aaKnown RBP14.43□□□□□ -0.1
CNOT9-208ENST00000542068 SLC9A3R1O14745 358 aaPredicted RBP14.43□□□□□ -0.1
CNOT9-208ENST00000542068 PI15O43692 258 aa14.43□□□□□ -0.1
CNOT9-208ENST00000542068 ICMTO60725 284 aa14.43□□□□□ -0.1
CNOT9-208ENST00000542068 SCO1O75880 301 aa14.43□□□□□ -0.1
CNOT9-208ENST00000542068 SLC35G4P0C7Q5 338 aa14.43□□□□□ -0.1
CNOT9-208ENST00000542068 GDPGP1Q6ZNW5 385 aa14.43□□□□□ -0.1
CNOT9-208ENST00000542068 SLC9B2Q86UD5 537 aa14.43□□□□□ -0.1
CNOT9-208ENST00000542068 NEIL3Q8TAT5 605 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms