RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CCDC74BQ96LY2 380 aa8.14□□□□□ -1.11
THBS3-210ENST00000541576 SERHL2Q9H4I8 314 aa8.14□□□□□ -1.11
THBS3-210ENST00000541576 ANKRA2Q9H9E1 313 aa8.14□□□□□ -1.11
THBS3-210ENST00000541576 OAZ3Q9UMX2 235 aa8.14□□□□□ -1.11
THBS3-210ENST00000541576 SAMD4AQ9UPU9 718 aaKnown RBP8.14□□□□□ -1.11
THBS3-210ENST00000541576 EP300Q09472 2414 aaPredicted RBP8.14□□□□□ -1.11
THBS3-210ENST00000541576 EI24O14681 340 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 LDOC1O95751 146 aaPredicted RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 MATN1P21941 496 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 FASP25445 335 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 ARSFP54793 590 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 CDK6Q00534 326 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 FOXD4Q12950 439 aaPredicted RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 SLC13A2Q13183 592 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 OTOGLQ3ZCN5 2332 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 ZBED5Q49AG3 693 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 INTS11Q5TA45 600 aaKnown RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 PRAMEF17Q5VTA0 474 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 IGFN1Q86VF2 1251 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 TMEM126BQ8IUX1 230 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 OR51Q1Q8NH59 317 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 NFKBIDQ8NI38 313 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 ADI1Q9BV57 179 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 TBCCD1Q9NVR7 557 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 DHCR7Q9UBM7 475 aaKnown RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 TMEM184BQ9Y519 407 aaPredicted RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 PCDHGA3Q9Y5H0 932 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 MAU2Q9Y6X3 613 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 TMEM229AB2RXF0 380 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 CLDN4O14493 209 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 NME6O75414 186 aaPredicted RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 CDC123O75794 336 aaPredicted RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 ZNF682O95780 498 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 ATP1B1P05026 303 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 HMGN2P05204 90 aaKnown RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 RAP2AP10114 183 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 ARAFP10398 606 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 FCGR1AP12314 374 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 CCNA2P20248 432 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 XCR1P46094 333 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 GCGRP47871 477 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 ANXA11P50995 505 aaKnown RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 MLLT10P55197 1068 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 DGCR6Q14129 220 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 LASP1Q14847 261 aaKnown RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 PHF19Q5T6S3 580 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 YOD1Q5VVQ6 348 aaPredicted RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 ZNF595Q8IYB9 648 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 NUP43Q8NFH3 380 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 RAB8BQ92930 207 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 ANKRD9Q96BM1 317 aaPredicted RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 THUMPD1Q9NXG2 353 aaKnown RBP8.13□□□□□ -1.11
THBS3-210ENST00000541576 FTSJ1Q9UET6 329 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 RPS6KA6Q9UK32 745 aa8.13□□□□□ -1.11
THBS3-210ENST00000541576 LINC00854A0A1B0GVQ3 168 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 D6RAR5 112 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 HMGN4O00479 90 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ZNF806P0C7X5 589 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ATXN8OSP0DMR3 200 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 NT5EP21589 574 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 SOX18P35713 384 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 OPRL1P41146 370 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 OR1D4P47884 311 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 KHKP50053 298 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 STX4Q12846 297 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 SF3A2Q15428 464 aaKnown RBP8.12□□□□□ -1.11
THBS3-210ENST00000541576 SLC30A8Q8IWU4 369 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ANKFN1Q8N957 763 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.12□□□□□ -1.11
THBS3-210ENST00000541576 OR7G2Q8NG99 324 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 DOK4Q8TEW6 326 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ATOH1Q92858 354 aaPredicted RBP8.12□□□□□ -1.11
THBS3-210ENST00000541576 SLC47A1Q96FL8 570 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 PYURFQ96I23 114 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 OR51I1Q9H343 314 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 TPK1Q9H3S4 243 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 PRTFDC1Q9NRG1 225 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 TRPC4Q9UBN4 977 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ANGPT4Q9Y264 503 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 NOX1Q9Y5S8 564 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 MAGED1Q9Y5V3 778 aaPredicted RBP8.12□□□□□ -1.11
THBS3-210ENST00000541576 ADAMTS20P59510 1910 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 C5orf58C9J3I9 102 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 UPK1AO00322 258 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 NTN3O00634 580 aaPredicted RBP8.12□□□□□ -1.11
THBS3-210ENST00000541576 DSCR3O14972 297 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 CTNSO60931 367 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 SLITRK5O94991 958 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 SNAP29O95721 258 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 GP1BAP07359 652 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 SLC35E2P0CK97 266 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 OR12D1P0DN82 309 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ACP1P24666 158 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ALDH3B2P48448 385 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ERV3-1Q14264 604 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ATP6AP1Q15904 470 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 ZNF628Q5EBL2 1059 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 CCDC81Q6ZN84 652 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 VTCN1Q7Z7D3 282 aa8.12□□□□□ -1.11
THBS3-210ENST00000541576 SLITRK4Q8IW52 837 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms