RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 KCNJ5P48544 419 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 SCN1BQ07699 218 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 GLYR1Q49A26 553 aaPredicted RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 TMEM196Q5HYL7 178 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 ZNF776Q68DI1 518 aaPredicted RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 ANKRD54Q6NXT1 300 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 GALNT12Q8IXK2 581 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 CREB3L4Q8TEY5 395 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 OR5P2Q8WZ92 322 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 DIRAS2Q96HU8 199 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 DHRS1Q96LJ7 313 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 CAMK1GQ96NX5 476 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 KLHL31Q9H511 634 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 PLSCR3Q9NRY6 295 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 DZANK1Q9NVP4 752 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 ANKRD34BA5PLL1 514 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 FABP12A6NFH5 140 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 H0Y8X5 98 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 NDUFS4O43181 175 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 SLC28A2O43868 658 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 RNGTTO60942 597 aaKnown RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 CXCR2P25025 360 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 SSTR4P31391 388 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 IGFALSP35858 605 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 TRIM23P36406 574 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 KIR2DL1P43626 348 aaPredicted RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 PPP2CBP62714 309 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 PPP2CAP67775 309 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 CSNK1G2P78368 415 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 SYPL1Q16563 259 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 OCLNQ16625 522 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 PODNL1Q6PEZ8 512 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 VASH1Q7L8A9 365 aaPredicted RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 NANOGNBQ7Z5D8 188 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 ASCC1Q8N9N2 400 aaKnown RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 TMEM145Q8NBT3 493 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 OR5D16Q8NGK9 328 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 LRR1Q96L50 414 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 DEPDC7Q96QD5 511 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 TEFMQ96QE5 360 aaKnown RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 BEX2Q9BXY8 128 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 RACGAP1Q9H0H5 632 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 RMI1Q9H9A7 625 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 PLEKHB1Q9UF11 243 aaPredicted RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 A4GNTQ9UNA3 340 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 SPIN1Q9Y657 262 aaPredicted RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 TMCC2O75069 709 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 CSF2P04141 144 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 CSF3P09919 207 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 RPS21P63220 83 aaKnown RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 DMPKQ09013 629 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 CDK10Q15131 360 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 SYT14P1Q58G82 188 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 OR2G6Q5TZ20 316 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 ACSM5Q6NUN0 579 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 MEX3DQ86XN8 651 aaKnown RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 OR52E1Q8NGJ3 308 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 TREX2Q9BQ50 279 aaPredicted RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 SLC22A4Q9H015 551 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 C11orf54Q9H0W9 315 aaPredicted RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 SERHL2Q9H4I8 314 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 CTPS2Q9NRF8 586 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 SIRT3Q9NTG7 399 aaPredicted RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 PAQR5Q9NXK6 330 aaPredicted RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 SPHK1Q9NYA1 384 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 ACSL5Q9ULC5 683 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 PRAMEF27A3QJZ7 478 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 POM121BA6NF01 834 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 CCDC182A6NF36 153 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 HMX3A6NHT5 357 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 GUCY1B2O75343 617 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 PDE9AO76083 593 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 RAB36O95755 333 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 OR12D1P0DN82 309 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 ERGP11308 486 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 COL9A1P20849 921 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 MMP11P24347 488 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 SDC2P34741 201 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 SSR2P43308 183 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 GINS1Q14691 196 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 ARHGAP19Q14CB8 494 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 ZNF750Q32MQ0 723 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 PDZK1Q5T2W1 519 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 UBE3DQ7Z6J8 389 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 SYT14Q8NB59 555 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 OR2A1Q8NGT9 310 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 FYTTD1Q96QD9 318 aaKnown RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 GPA33Q99795 319 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 TMEM246Q9BRR3 403 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 FUZQ9BT04 418 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 FGF22Q9HCT0 170 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 WASH6PQ9NQA3 447 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 NUFIP1Q9UHK0 495 aaKnown RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 SNX7Q9UNH6 387 aa11.78□□□□□ -0.52
RNF4-222ENST00000541204 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
RNF4-222ENST00000541204 CKAP5Q14008 2032 aa11.77□□□□□ -0.52
RNF4-222ENST00000541204 ERAL1O75616 437 aaKnown RBP11.77□□□□□ -0.53
RNF4-222ENST00000541204 KLF8O95600 359 aaPredicted RBP11.77□□□□□ -0.53
RNF4-222ENST00000541204 IL1AP01583 271 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms