RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 CDCA4Q9BXL8 241 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 TMEM74BQ9NUR3 256 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 MS4A12Q9NXJ0 267 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 GSAPA4D1B5 854 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 OR5K4A6NMS3 321 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 M0R129 80 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 B3GALT2O43825 422 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 OR10H3O60404 316 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 ZBTB11O95625 1053 aaPredicted RBP12.92□□□□□ -0.34
RTN3-210ENST00000540798 FZD2Q14332 565 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 GPAT3Q53EU6 434 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 FHL5Q5TD97 284 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 MFSD12Q6NUT3 480 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 CDC73Q6P1J9 531 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 ABHD13Q7L211 337 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 ZNF687Q8N1G0 1237 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 B3GNT7Q8NFL0 401 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 NR4A3Q92570 626 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 KAT2AQ92830 837 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 SLC38A4Q969I6 547 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 SLC35A4Q96G79 324 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 MS4A4EQ96PG1 132 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 ANKRA2Q9H9E1 313 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 BRWD1Q9NSI6 2320 aa12.92□□□□□ -0.34
RTN3-210ENST00000540798 A0A0J9YY10 115 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 IFI6P09912 130 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 BMXP51813 675 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 NUDT6P53370 316 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 LIMK1P53667 647 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 COX10Q12887 443 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 DEFB134Q4QY38 66 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 C1orf94Q6P1W5 598 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 OR4K14Q8NGD5 310 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 OR10G6Q8NH81 332 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 DYNC2LI1Q8TCX1 351 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 TRUB1Q8WWH5 349 aaKnown RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 VMP1Q96GC9 406 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 CHRDQ9H2X0 955 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 MRPS2Q9Y399 296 aaKnown RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 EFCAB10A6NFE3 127 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 H0YGG7 62 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 CELA2BP08218 269 aaPredicted RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 STSP08842 583 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 PRKAR1BP31321 381 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 LIPAP38571 399 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 XKP51811 444 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 DGKEP52429 567 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ARF3P61204 181 aaPredicted RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 CHRNEQ04844 493 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 KLHL35Q6PF15 583 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 Q6ZS52 159 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 NDNFQ8TB73 568 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ZCCHC10Q8TBK6 192 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 SLC37A2Q8TED4 501 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 FNDC11Q9BVV2 318 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 AMBNQ9NP70 447 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 PALMDQ9NP74 551 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 WSB2Q9NYS7 404 aaPredicted RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 PTGFRNQ9P2B2 879 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 RBMX2Q9Y388 322 aaKnown RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 H3BQ06 376 aaPredicted RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 TLR4O00206 839 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 AGR2O95994 175 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ALPPP05187 535 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ADRA2AP08913 450 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ADORA3P0DMS8 318 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 CD36P16671 472 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ALOX12P18054 663 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ZNF10P21506 573 aaPredicted RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 NUDT1P36639 197 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ST3GAL4Q11206 333 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ZNF628Q5EBL2 1059 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ENTPD8Q5MY95 495 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 PTCHD4Q6ZW05 846 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 ZER1Q7Z7L7 766 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 SFTPA2Q8IWL1 248 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 IQCF2Q8IXL9 164 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 C9orf43Q8TAL5 461 aaPredicted RBP12.91□□□□□ -0.34
RTN3-210ENST00000540798 CRELD1Q96HD1 420 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 SLC2A4RGQ9NR83 387 aa12.91□□□□□ -0.34
RTN3-210ENST00000540798 TMEM131Q92545 1883 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 EYSQ5T1H1 3165 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 DUXAA6NLW8 204 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 IGFBP1P08833 259 aaPredicted RBP12.9□□□□□ -0.34
RTN3-210ENST00000540798 MMP11P24347 488 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 ZNF311Q5JNZ3 666 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 SLC25A30Q5SVS4 291 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 FGF11Q92914 225 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 QRSL1Q9H0R6 528 aaKnown RBP12.9□□□□□ -0.34
RTN3-210ENST00000540798 POLR2J3Q9H1A7 115 aaKnown RBP12.9□□□□□ -0.34
RTN3-210ENST00000540798 CLN6Q9NWW5 311 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 CYP8B1Q9UNU6 501 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 N6AMT1Q9Y5N5 214 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 TPST2O60704 377 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 CPMP14384 443 aa12.9□□□□□ -0.34
RTN3-210ENST00000540798 TARDBPQ13148 414 aaKnown RBP eCLIP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms