RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PRAP1Q96NZ9 151 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 SLC38A2Q96QD8 506 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 NRTNQ99748 197 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 PITHD1Q9GZP4 211 aaPredicted RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 DDX31Q9H8H2 851 aaKnown RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 ZCCHC3Q9NUD5 404 aaKnown RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 RBFOX1Q9NWB1 397 aaKnown RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 PCYT1BQ9Y5K3 369 aaPredicted RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 PTPRSQ13332 1948 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 NDUFS4O43181 175 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 TRIM3O75382 744 aaPredicted RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 FGBP02675 491 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 PRNPP04156 253 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 C6P13671 934 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 DRD2P14416 443 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 ERP29P30040 261 aaKnown RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 HSD17B2P37059 387 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 IFNGR2P38484 337 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 SLC6A11P48066 632 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 KHKP50053 298 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 TATDN3Q17R31 274 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 UAP1L1Q3KQV9 507 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 PLPP4Q5VZY2 271 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 TRIQKQ629K1 86 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 TYW3Q6IPR3 259 aaKnown RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 AMER3Q8N944 861 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 OR7G1Q8NGA0 311 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 COQ7Q99807 217 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 ATF6BQ99941 703 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 GON7Q9BXV9 100 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 PCBD2Q9H0N5 130 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 SYNDIG1Q9H7V2 258 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 RPRD1BQ9NQG5 326 aaKnown RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 GPR52Q9Y2T5 361 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 PRKAB1Q9Y478 270 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 LRRK1Q38SD2 2015 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 A0A087WUU8 490 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 OR6C70A6NIJ9 312 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 CASC3O15234 703 aaKnown RBP11.56□□□□□ -0.56
NPC1-202ENST00000540608 HPGDSO60760 199 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 UBXN7O94888 489 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 CHRM4P08173 479 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 CISD3P0C7P0 127 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 BUD31P41223 144 aaPredicted RBP11.56□□□□□ -0.56
NPC1-202ENST00000540608 EVX1P49640 407 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 ST8SIA6P61647 398 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 GALK2Q01415 458 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 MESP2Q0VG99 397 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 GNA13Q14344 377 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 OR4C11Q6IEV9 310 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 PRICKLE2Q7Z3G6 844 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 PEX5LQ8IYB4 626 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 YIPF7Q8N8F6 280 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 DPH7Q9BTV6 452 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 PINK1Q9BXM7 581 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 CTPS2Q9NRF8 586 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 NOTCH4Q99466 2003 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 A0A0G2JPF8 293 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 HNRNPCL2B2RXH8 293 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 HNRNPCL3B7ZW38 293 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 FAM157BP0CG42 384 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 HNRNPCL4P0DMR1 293 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 PRKAR1AP10644 381 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 CD79BP40259 229 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 FAPQ12884 760 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 TSPAN31Q12999 210 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 MADCAM1Q13477 382 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 ARHGAP15Q53QZ3 475 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 PAMR1Q6UXH9 720 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 HMGN2P46Q86SG4 172 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 LHFPL3Q86UP9 236 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 AMZ2Q86W34 360 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 C12orf40Q86WS4 652 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 MEX3DQ86XN8 651 aaKnown RBP11.56□□□□□ -0.56
NPC1-202ENST00000540608 ARIH2OSQ8N7S6 290 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 NLGN4YQ8NFZ3 816 aaPredicted RBP11.56□□□□□ -0.56
NPC1-202ENST00000540608 OR8D4Q8NGM9 314 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 OR5K2Q8NHB8 316 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 SUN3Q8TAQ9 357 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 ZFAND1Q8TCF1 268 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 ARRDC3Q96B67 414 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 OTUB2Q96DC9 234 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 CAMK1GQ96NX5 476 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 SLC35C2Q9NQQ7 365 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 GIMAP4Q9NUV9 329 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 A0A0A6YYD5 115 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 OR1F1O43749 312 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 FGF19O95750 216 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 PSKH1P11801 424 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 SLC1A3P43003 542 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 ANXA11P50995 505 aaKnown RBP11.56□□□□□ -0.56
NPC1-202ENST00000540608 NCBP2P52298 156 aaKnown RBP eCLIP11.56□□□□□ -0.56
NPC1-202ENST00000540608 GNG2P59768 71 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 FUT5Q11128 374 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 RIN1Q13671 783 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 EFR3AQ14156 821 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 TCEAL5Q5H9L2 206 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 NDUFAF5Q5TEU4 345 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms