RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 FCRLBQ6BAA4 426 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 VITQ6UXI7 678 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 CCDC190Q86UF4 302 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 KRT73Q86Y46 540 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 FRMD1Q8N878 549 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 ACOT4Q8N9L9 421 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF582Q96NG8 517 aaPredicted RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MENTQ9BUN1 341 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 TAPBPLQ9BX59 468 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 SP140LQ9H930 580 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MRPS30Q9NP92 439 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 TXNL4BQ9NX01 149 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 CCDC59Q9P031 241 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 DPP7Q9UHL4 492 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 SLC13A4Q9UKG4 626 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 ICKQ9UPZ9 632 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 RPL36Q9Y3U8 105 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 DSPPQ9NZW4 1301 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 CENPVL1A0A0U1RR11 272 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 C17orf113A0A1B0GUU1 675 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 H0Y8X5 98 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 VEGFDO43915 354 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 LALBAP00709 142 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 NTSP30990 170 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 PXNP49023 591 aaPredicted RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 SLC16A1P53985 500 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 SLC9A5Q14940 896 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 TOR1AIP1Q5JTV8 583 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MFSD4BQ5TF39 518 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF557Q8N988 423 aaPredicted RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MINDY2Q8NBR6 621 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 OR52E1Q8NGJ3 308 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 RNFT2Q96EX2 444 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MND1Q9BWT6 205 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MED20Q9H944 212 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 NEK6Q9HC98 313 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MAFFQ9ULX9 164 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 SLC9A8Q9Y2E8 581 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 LSM2Q9Y333 95 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 SH3D21A4FU49 640 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 BTN3A3O00478 584 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 HRO43593 1189 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MYL12AP19105 171 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MAGEA8P43361 318 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MAPK9P45984 424 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 RORCP51449 518 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 RACK1P63244 317 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 BTN3A2P78410 334 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 PCDH1Q08174 1060 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 LRRC32Q14392 662 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 HSDL2Q6YN16 418 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 C9orf43Q8TAL5 461 aaPredicted RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 CAMK1GQ96NX5 476 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 OR2A14Q96R47 310 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 SAP130Q9H0E3 1048 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 CD93Q9NPY3 652 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 SEMA4GQ9NTN9 838 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 TMEM74BQ9NUR3 256 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 CNOT2Q9NZN8 540 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 WBP11Q9Y2W2 641 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 C1QTNF3-AMACRE9PGA6 284 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 PDE9AO76083 593 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 SLITRK5O94991 958 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 EML2O95834 649 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 EIF2S1P05198 315 aaKnown RBP12.84□□□□□ -0.35
BNIP3-202ENST00000540159 KRT8P05787 483 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 STXBP1P61764 594 aaKnown RBP12.84□□□□□ -0.35
BNIP3-202ENST00000540159 MRPS15P82914 257 aaKnown RBP12.84□□□□□ -0.35
BNIP3-202ENST00000540159 REEP5Q00765 189 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 PYDC2Q56P42 97 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 NANOGP1Q8N7R0 232 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 IL17RDQ8NFM7 739 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 OR52P1PQ8NH57 321 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 CCL4L1Q8NHW4 92 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 KXD1Q9BQD3 176 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 ISPDA4D126 451 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 LINC01553A4QN01 128 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 CD8B2A6NJW9 211 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 MPZL2O60487 215 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 CD8BP10966 210 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 IL7P13232 177 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 CELP19835 753 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 CXCR2P25025 360 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 SIM1P81133 766 aaPredicted RBP12.84□□□□□ -0.35
BNIP3-202ENST00000540159 SRSF5Q13243 272 aaKnown RBP12.84□□□□□ -0.35
BNIP3-202ENST00000540159 C16orf62Q7Z3J2 963 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 SLC16A11Q8NCK7 471 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 TMIEQ8NEW7 156 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 OTUB2Q96DC9 234 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 LINC00615Q96LM1 132 aaPredicted RBP12.84□□□□□ -0.35
BNIP3-202ENST00000540159 RPP25Q9BUL9 199 aaKnown RBP12.84□□□□□ -0.35
BNIP3-202ENST00000540159 NXF2Q9GZY0 626 aaKnown RBP12.84□□□□□ -0.35
BNIP3-202ENST00000540159 SLC6A20Q9NP91 592 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 PLSCR3Q9NRY6 295 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 STUB1Q9UNE7 303 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 V9GYH0 126 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 SEC16AO15027 2179 aa12.84□□□□□ -0.35
BNIP3-202ENST00000540159 NFATC1O95644 943 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms