RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 HEMK1Q9Y5R4 338 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NSG1A0A0A6YYJ2 146 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MASP2O00187 686 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 DNAJC8O75937 253 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MAN2A2P49641 1150 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 EXOSC6Q5RKV6 272 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 TNFAIP8L2Q6P589 184 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NDUFAF7Q7L592 441 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 OR5D16Q8NGK9 328 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MIPOL1Q8TD10 442 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CLPTM1LQ96KA5 538 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 VSTM2LQ96N03 204 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ZNF583Q96ND8 569 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ECSITQ9BQ95 431 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ACTRT3Q9BYD9 372 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 OR51I1Q9H343 314 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 RAD21L1Q9H4I0 556 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PIF1Q9H611 641 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PRPF19Q9UMS4 504 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 FAF1Q9UNN5 650 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CORO2BQ9UQ03 480 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SSUH2Q9Y2M2 353 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PRORSD1PA6NEY8 169 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NUDT7P0C024 238 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ACP2P11117 423 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MAP3K8P41279 467 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PRIM2P49643 509 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 GZMMP51124 257 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 LIPEQ05469 1076 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ZNF155Q12901 538 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 FADDQ13158 208 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ATP1A4Q13733 1029 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CEACAM7Q14002 265 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 BTBD16Q32M84 506 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CDC73Q6P1J9 531 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ZNF771Q7L3S4 317 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CALHM3Q86XJ0 350 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 C9orf40Q8IXQ3 194 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SLC16A11Q8NCK7 471 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 JADE3Q92613 823 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 RAB8BQ92930 207 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 VMP1Q96GC9 406 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 DPH1Q9BZG8 443 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ZNF160Q9HCG1 818 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CD300AQ9UGN4 299 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 FBXL4Q9UKA2 621 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 USP22Q9UPT9 525 aa17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CCDC88CQ9P219 2028 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 HMGN4O00479 90 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 TNFRSF21O75509 655 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 HPP00738 406 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CELA2AP08217 269 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 OR12D1P0DN82 309 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PGM1P36871 562 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 GSK3BP49841 420 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 EEFSECP57772 596 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 EBPQ15125 230 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PIGGQ5H8A4 983 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SAMD4BQ5PRF9 694 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ATP1A1-AS1Q5TC04 95 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PLAG1Q6DJT9 500 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ZCCHC12Q6PEW1 402 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 IFNEQ86WN2 208 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CDRT4Q8N9R6 151 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SLC9A6Q92581 669 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 HOXB13Q92826 284 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 OR7D2Q96RA2 312 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ITPAQ9BY32 194 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PRODH2Q9UF12 536 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 KCNE3Q9Y6H6 103 aa17.55■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PCSK5Q92824 1860 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CDC14CA4D256 554 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PEX12O00623 359 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 NKX2-8O15522 239 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PRKNO60260 465 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PDE5AO76074 875 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SORBS2O94875 1100 aaKnown RBP17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 BMP2P12643 396 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 KHKP50053 298 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CLCN2P51788 898 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CORO7P57737 925 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PSG6Q00889 435 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MYBPC3Q14896 1274 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ADRM1Q16186 407 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 EXT1Q16394 746 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 DUSP5Q16690 384 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PGM2L1Q6PCE3 622 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SERPINA11Q86U17 422 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 LGI4Q8N135 537 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ARHGAP24Q8N264 748 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 FAM156AQ8NDB6 213 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 M1APQ8TC57 530 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ELP5Q8TE02 316 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ADAMTS15Q8TE58 950 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MCUR1Q96AQ8 359 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SLC35A4Q96G79 324 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 VPS50Q96JG6 964 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 IP6K3Q96PC2 410 aa17.54■□□□□ 0.4
TNFRSF1A-213ENST00000540022 LMF2Q9BU23 707 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms