RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 HAPLN2Q9GZV7 340 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 SRA1Q9HD15 236 aaKnown RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ENPP4Q9Y6X5 453 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RNASET2O00584 256 aaKnown RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 MMP2P08253 660 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RBMS1P29558 406 aaKnown RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 UBE2NP61088 152 aaKnown RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 SELENOWP63302 87 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 PITX1P78337 314 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 FIGNL1Q6PIW4 674 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 COMMD6Q7Z4G1 85 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 KLBQ86Z14 1044 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF611Q8N823 705 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 FAM174AQ8TBP5 190 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 TRIM43Q96BQ3 446 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 APOOQ9BUR5 198 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 IRF2BPLQ9H1B7 796 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ACOT13Q9NPJ3 140 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ARMC1Q9NVT9 282 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 GDE1Q9NZC3 331 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 PCDHA9Q9Y5H5 950 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 AGAP5A6NIR3 686 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 A6NIZ1 184 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CD8B2A6NJW9 211 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 INMT-MINDY4F8WBC2 141 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 SLC1A7O00341 560 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 PTGESO14684 152 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RFPL2O75678 378 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ADAP00813 363 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 PROS1P07225 676 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CD8BP10966 210 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ART1P52961 327 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RAP1BP61224 184 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RAP1AP62834 184 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 KEAP1Q14145 624 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 PON2Q15165 354 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 MPP7Q5T2T1 576 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 TMEM205Q6UW68 189 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ABHD12BQ7Z5M8 362 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 PXKQ7Z7A4 578 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CENPSQ8N2Z9 138 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ANKLE1Q8NAG6 615 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 PHOSPHO2Q8TCD6 241 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 LRRC15Q8TF66 581 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ZFYVE21Q9BQ24 234 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 FAM86C1Q9NVL1 165 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ICKQ9UPZ9 632 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 SLC35A3Q9Y2D2 325 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 A0A0J9YY10 115 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 MEGF11A6BM72 1044 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 GRXCR2A6NFK2 248 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 DRGXA6NNA5 263 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 J3QRK9 145 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 POLR1CO15160 346 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 HLCSP50747 726 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CTXN1P60606 82 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 TRA2BP62995 288 aaKnown RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 NKX3-2P78367 333 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 EFR3AQ14156 821 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 KIR2DS3Q14952 304 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 MICAQ29983 383 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 TBRG1Q3YBR2 411 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CDNFQ49AH0 187 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 SLC22A10Q63ZE4 541 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 LEG1Q6P5S2 330 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RANBP10Q6VN20 620 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 NAXEQ8NCW5 288 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 JPH3Q8WXH2 748 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 STRA6Q9BX79 667 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ADAMTS6Q9UKP5 1117 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 AHDC1Q5TGY3 1603 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 MARF1Q9Y4F3 1742 aaKnown RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CREBL2O60519 120 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 SFTPBP07988 381 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 STSP08842 583 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 THEGLP0DJG4 465 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RAC2P15153 192 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CRABP1P29762 137 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ECH1Q13011 328 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 SIX1Q15475 284 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RTP2Q5QGT7 225 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CREB3L4Q8TEY5 395 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 IGSF5Q9NSI5 407 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ERVK-18Q9QC07 812 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 HSFX1Q9UBD0 423 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 NUP205Q92621 2012 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 DOCK2Q92608 1830 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 GGT3PA6NGU5 568 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 M0R233 179 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 KIAA0513O60268 411 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 S100PP25815 95 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 HOXC13P31276 330 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CD70P32970 193 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 FXYD6P3P58550 94 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 C1orf61Q13536 156 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ARL6IP1Q15041 203 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 NR0B2Q15466 257 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 OGFRL1Q5TC84 451 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 HTR3DQ70Z44 454 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms