RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 AGFG1P52594 562 aaKnown RBP11.39□□□□□ -0.59
VAMP1-206ENST00000538970 DCAF7P61962 342 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 TRA2BP62995 288 aaKnown RBP11.39□□□□□ -0.59
VAMP1-206ENST00000538970 MRPS35P82673 323 aaKnown RBP11.39□□□□□ -0.59
VAMP1-206ENST00000538970 SORDQ00796 357 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 RCAN2Q14206 197 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 CEBPEQ15744 281 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 ZNF628Q5EBL2 1059 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 TCHHL1Q5QJ38 904 aaPredicted RBP11.39□□□□□ -0.59
VAMP1-206ENST00000538970 PAMR1Q6UXH9 720 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 WDSUB1Q8N9V3 476 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 GOT1L1Q8NHS2 421 aaPredicted RBP11.39□□□□□ -0.59
VAMP1-206ENST00000538970 ZPLD1Q8TCW7 415 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 ALPK1Q96QP1 1244 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 FMO2Q99518 471 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 REPIN1Q9BWE0 567 aaKnown RBP11.39□□□□□ -0.59
VAMP1-206ENST00000538970 OR2B2Q9GZK3 357 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 TSPYL1Q9H0U9 437 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 EPB41L4BQ9H329 900 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 SERHLQ9NQF3 203 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 NMRK1Q9NWW6 199 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 PRODH2Q9UF12 536 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 DMGDHQ9UI17 866 aaKnown RBP11.39□□□□□ -0.59
VAMP1-206ENST00000538970 UTS2RQ9UKP6 389 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 PSME2Q9UL46 239 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 ZNF780BQ9Y6R6 833 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 KIAA1549Q9HCM3 1950 aa11.39□□□□□ -0.59
VAMP1-206ENST00000538970 TUBAL3A6NHL2 446 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 POC1B-GALNT4F8VUJ3 575 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 CBR3O75828 277 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 IL18BPO95998 194 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 TMIGD3P0DMS9 266 aaPredicted RBP11.38□□□□□ -0.59
VAMP1-206ENST00000538970 CYP4B1P13584 511 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 HSD3B1P14060 373 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 CPN1P15169 458 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 DNASE1P24855 282 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 HSD3B2P26439 372 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 GCKP35557 465 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 HSD17B3P37058 310 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 SLCO1A2P46721 670 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 PPP2R2AP63151 447 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 CLCQ05315 142 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 CSTF3Q12996 717 aaKnown RBP11.38□□□□□ -0.59
VAMP1-206ENST00000538970 WHAMMP3Q1A5X7 153 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 ADGRE4PQ86SQ3 457 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 KIF18BQ86Y91 864 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 MMGT1Q8N4V1 131 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 CDYL2Q8N8U2 506 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 OR14L1PQ8NHC6 308 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
VAMP1-206ENST00000538970 ZNF675Q8TD23 568 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 TMBIM1Q969X1 311 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 SLC35A4Q96G79 324 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 BTBD9Q96Q07 612 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 TUBA1CQ9BQE3 449 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 HEY2Q9UBP5 337 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 VPS29Q9UBQ0 182 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 MCM8Q9UJA3 840 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 EDARQ9UNE0 448 aa11.38□□□□□ -0.59
VAMP1-206ENST00000538970 EXO1Q9UQ84 846 aaKnown RBP11.38□□□□□ -0.59
VAMP1-206ENST00000538970 GPR55Q9Y2T6 319 aaPredicted RBP11.38□□□□□ -0.59
VAMP1-206ENST00000538970 NINQ8N4C6 2090 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 MAP1AP78559 2803 aaPredicted RBP11.37□□□□□ -0.59
VAMP1-206ENST00000538970 A0A087WUV0 522 aaPredicted RBP11.37□□□□□ -0.59
VAMP1-206ENST00000538970 OR6C70A6NIJ9 312 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 H0Y3Z8 333 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 MANBAO00462 879 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 PCDH7O60245 1069 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 KRT6AP02538 564 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 KRT6BP04259 564 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 IL3P08700 152 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 EPXP11678 715 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 CHN1P15882 459 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 KRT6CP48668 564 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 DGKQP52824 942 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 GFRA1P56159 465 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 HMGCS1Q01581 520 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 FOXF2Q12947 444 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 RASA2Q15283 850 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 UNC50Q53HI1 259 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 ZNF678Q5SXM1 525 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 Q71RC1 249 aaPredicted RBP11.37□□□□□ -0.59
VAMP1-206ENST00000538970 NOA1Q8NC60 698 aaKnown RBP11.37□□□□□ -0.59
VAMP1-206ENST00000538970 LINC01560Q8TB33 94 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 IFT81Q8WYA0 676 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 TMCO6Q96DC7 493 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 ERP27Q96DN0 273 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 MBD6Q96DN6 1003 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 ZFP3Q96NJ6 502 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 COL21A1Q96P44 957 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 TMEM237Q96Q45 408 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 ZNF382Q96SR6 550 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 G6PC3Q9BUM1 346 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 SFXN3Q9BWM7 321 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 ACPTQ9BZG2 426 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 ANKRA2Q9H9E1 313 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 WIF1Q9Y5W5 379 aa11.37□□□□□ -0.59
VAMP1-206ENST00000538970 ACANP16112 2415 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 CLCA1A8K7I4 914 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms