RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 UBE3AQ05086 875 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 HYAL2Q12891 473 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 ZIC1Q15915 447 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 C18orf63Q68DL7 685 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 SLC27A4Q6P1M0 643 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 UTS2BQ765I0 119 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 PRICKLE2Q7Z3G6 844 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 OR8D4Q8NGM9 314 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 OR6F1Q8NGZ6 308 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 SFXN5Q8TD22 340 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 MS4A6EQ96DS6 147 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 MSLNLQ96KJ4 702 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 TEX101Q9BY14 249 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 MIXL1Q9H2W2 232 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 WDR26Q9H7D7 661 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 MRPS30Q9NP92 439 aaKnown RBP13.47□□□□□ -0.25
USP44-203ENST00000537435 MRPS18AQ9NVS2 196 aaKnown RBP13.47□□□□□ -0.25
USP44-203ENST00000537435 PLEKHB1Q9UF11 243 aaPredicted RBP13.47□□□□□ -0.25
USP44-203ENST00000537435 HEATR5BQ9P2D3 2071 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 A0A1W2PQL4 384 aaPredicted RBP13.46□□□□□ -0.25
USP44-203ENST00000537435 SMIM30A4D0T7 59 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 FAM170BA6NMN3 283 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 STK25O00506 426 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 MID1O15344 667 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 SDC2P34741 201 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
USP44-203ENST00000537435 RAB40BQ12829 278 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 MAP4K2Q12851 820 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 NUMA1Q14980 2115 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 PLK5Q496M5 336 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 GLYR1Q49A26 553 aaPredicted RBP13.46□□□□□ -0.25
USP44-203ENST00000537435 CCDC92Q53HC0 331 aaPredicted RBP13.46□□□□□ -0.25
USP44-203ENST00000537435 ZNF311Q5JNZ3 666 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 SHFQ7M4L6 423 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 RAB43Q86YS6 212 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 CLDN22Q8N7P3 220 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 ACOT4Q8N9L9 421 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 SP7Q8TDD2 431 aaPredicted RBP13.46□□□□□ -0.25
USP44-203ENST00000537435 GNPDA2Q8TDQ7 276 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 C1GALT1C1Q96EU7 318 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 KCTD7Q96MP8 289 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 TRMT61BQ9BVS5 477 aaKnown RBP13.46□□□□□ -0.25
USP44-203ENST00000537435 ANKRA2Q9H9E1 313 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 FGF20Q9NP95 211 aaPredicted RBP13.46□□□□□ -0.25
USP44-203ENST00000537435 PRDM7Q9NQW5 492 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 CNIH4Q9P003 139 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 ENTPD4Q9Y227 616 aa13.46□□□□□ -0.25
USP44-203ENST00000537435 TMEM129A0AVI4 362 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 NTN1O95631 604 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 AIFM1O95831 613 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 FHP07954 510 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 ATP5A1P25705 553 aaKnown RBP13.46□□□□□ -0.26
USP44-203ENST00000537435 PKLRP30613 574 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 MRM1Q6IN84 353 aaKnown RBP13.46□□□□□ -0.26
USP44-203ENST00000537435 ABHD17CQ6PCB6 329 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 VRK2Q86Y07 508 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 FAM181AQ8N9Y4 354 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 SYT14Q8NB59 555 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 ANKK1Q8NFD2 765 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 OR56A1Q8NGH5 318 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 KLK6Q92876 244 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 ZG16BQ96DA0 208 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 ASB16Q96NS5 453 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 OR7D2Q96RA2 312 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 MARCH7Q9H992 704 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 SLC6A20Q9NP91 592 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 EQTNQ9NQ60 294 aa13.46□□□□□ -0.26
USP44-203ENST00000537435 GPR55Q9Y2T6 319 aaPredicted RBP13.46□□□□□ -0.26
USP44-203ENST00000537435 SF3B6Q9Y3B4 125 aaKnown RBP13.46□□□□□ -0.26
USP44-203ENST00000537435 CPSF4LA6NMK7 179 aaKnown RBP13.45□□□□□ -0.26
USP44-203ENST00000537435 SNTNA6NMZ2 147 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 UBXN7O94888 489 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 PAK4O96013 591 aaPredicted RBP13.45□□□□□ -0.26
USP44-203ENST00000537435 WASP42768 502 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 MTNR1AP48039 350 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 SLC9A3P48764 834 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 DAB2P98082 770 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 CHRNEQ04844 493 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 DMPKQ09013 629 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 KRT33BQ14525 404 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 IRF4Q15306 451 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 MINDY4Q4G0A6 757 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 CRTC2Q53ET0 693 aaPredicted RBP13.45□□□□□ -0.26
USP44-203ENST00000537435 CLEC12AQ5QGZ9 265 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 ATAD3CQ5T2N8 411 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 AGBL4Q5VU57 503 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 OR2L8Q8NGY9 312 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 DIRAS2Q96HU8 199 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 FAM46AQ96IP4 442 aaKnown RBP13.45□□□□□ -0.26
USP44-203ENST00000537435 TM9SF2Q99805 663 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 MCOLN1Q9GZU1 580 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 SLC38A1Q9H2H9 487 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 TP63Q9H3D4 680 aaPredicted RBP13.45□□□□□ -0.26
USP44-203ENST00000537435 SEMA4GQ9NTN9 838 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 THAP10Q9P2Z0 257 aaPredicted RBP13.45□□□□□ -0.26
USP44-203ENST00000537435 SLC13A4Q9UKG4 626 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 PLEKHM1Q9Y4G2 1056 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 IRGMA1A4Y4 181 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms