RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 LRRC40Q9H9A6 602 aa8.32□□□□□ -1.08
CPSF7-217ENST00000537162 SNX15Q9NRS6 342 aa8.32□□□□□ -1.08
CPSF7-217ENST00000537162 EHD3Q9NZN3 535 aa8.32□□□□□ -1.08
CPSF7-217ENST00000537162 KLRF1Q9NZS2 232 aa8.32□□□□□ -1.08
CPSF7-217ENST00000537162 MED16Q9Y2X0 877 aa8.32□□□□□ -1.08
CPSF7-217ENST00000537162 NOTCH3Q9UM47 2321 aa8.32□□□□□ -1.08
CPSF7-217ENST00000537162 SLC22A31A6NKX4 558 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 WASHC1A8K0Z3 465 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 EFCAB8A8MWE9 144 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 GOLGA8KD6RF30 607 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 H3BML4 177 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 GOLGA8TH3BQL2 631 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 LYZL6O75951 148 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 PNPP00491 289 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 MSMBP08118 114 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 MPC1LP0DKB6 136 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 GGT5P36269 586 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 TMED10P49755 219 aaKnown RBP8.31□□□□□ -1.08
CPSF7-217ENST00000537162 RPP38P78345 283 aaKnown RBP8.31□□□□□ -1.08
CPSF7-217ENST00000537162 NFKBIBQ15653 356 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 TUSC1Q2TAM9 212 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 SWT1Q5T5J6 900 aaKnown RBP8.31□□□□□ -1.08
CPSF7-217ENST00000537162 ADNP2Q6IQ32 1131 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 TMEM81Q6P7N7 255 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 TBC1D19Q8N5T2 526 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 METTL25Q8N6Q8 603 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 DVL3Q92997 716 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-217ENST00000537162 TMIGD2Q96BF3 282 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 RADILQ96JH8 1075 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 SERINC2Q96SA4 455 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 HAUS8Q9BT25 410 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 HEMGNQ9BXL5 484 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 RSPO3Q9BXY4 272 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-217ENST00000537162 TMPRSS13Q9BYE2 586 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 NARFLQ9H6Q4 476 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 MYOZ1Q9NP98 299 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-217ENST00000537162 SLC17A6Q9P2U8 582 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 ASIC3Q9UHC3 531 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 RIMKLBQ9ULI2 386 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 MRPS18CQ9Y3D5 142 aaKnown RBP8.31□□□□□ -1.08
CPSF7-217ENST00000537162 ATP23Q9Y6H3 246 aa8.31□□□□□ -1.08
CPSF7-217ENST00000537162 PRAMEF25A6NGN4 478 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 ZNF814B7Z6K7 855 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 LYNX1G3V0Z9 82 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 WNT9BO14905 357 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 TIMM23O14925 209 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 CDH16O75309 829 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 UGT2B11O75310 529 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 PRKRAO75569 313 aaKnown RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 PPM1BO75688 479 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 SNUPNO95149 360 aaKnown RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 KNG1P01042 644 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 LYNX1P0DP58 116 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 FCGR2AP12318 317 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 ENO3P13929 434 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 ZNF83P51522 516 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 EEFSECP57772 596 aaKnown RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 STXBP1P61764 594 aaKnown RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 HMGCS1Q01581 520 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 POU4F1Q01851 419 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 CTBP1Q13363 440 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 RIN1Q13671 783 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 CSHL1Q14406 222 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 ZNHIT3Q15649 155 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 SGCBQ16585 318 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 ODF2Q5BJF6 829 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 ZNF549Q6P9A3 640 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 GGNQ86UU5 652 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 CARM1Q86X55 608 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 ACTL9Q8TC94 416 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 SLC5A11Q8WWX8 675 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 INPP5KQ9BT40 448 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 PRRG4Q9BZD6 226 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 STMN4Q9H169 189 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 NXF5Q9H1B4 397 aaKnown RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 NTN4Q9HB63 628 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 G6PC2Q9NQR9 355 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 PRDM7Q9NQW5 492 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 CHRAC1Q9NRG0 131 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 AURKAIP1Q9NWT8 199 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 DDX56Q9NY93 547 aaKnown RBP8.3□□□□□ -1.08
CPSF7-217ENST00000537162 UVRAGQ9P2Y5 699 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 NENFQ9UMX5 172 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 TCAF1Q9Y4C2 921 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 CORINQ9Y5Q5 1042 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 MMP24Q9Y5R2 645 aa8.3□□□□□ -1.08
CPSF7-217ENST00000537162 LYSTQ99698 3801 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 PLXNB1O43157 2135 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 A0A1W2PR80 420 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 A0A1W2PS29 197 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 OR6C76A6NM76 312 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 E5RI56 91 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 EEDO75530 441 aaKnown RBP8.29□□□□□ -1.08
CPSF7-217ENST00000537162 PRSS23O95084 383 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 RNASE1P07998 156 aaKnown RBP8.29□□□□□ -1.08
CPSF7-217ENST00000537162 DHRS4L1P0CG22 281 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 BMP4P12644 408 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 DAOP14920 347 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms